Gene Ava_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0809 
Symbol 
ID3680749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp989284 
End bp989940 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content41% 
IMG OID637716138 
ProductHAD family hydrolase 
Protein accessionYP_321328 
Protein GI75907032 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02252] REG-2-like, HAD superfamily (subfamily IA) hydrolase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGGC CTAAAGTTAT TTTTGTGGAT GCTGTGGGGA CACTCTTCGG CGTTAAGGGT 
AGTGTCGGAA AAGTTTACAG TCAAATAGCC CAAGAGTTTG GTGTAGAAGT TGCACCGGAT
ATTGTGGATA AAGCATTTAT GGAAAGTTTT AAAGCGTCGC CGCCACCTAT CTTTCCTGAT
GCTGACGCTG AAGACATACC ACAACGTGAA TTTGAGTGGT GGCGTAGAAT TGCTCTAAAT
ACCTTTGAAA GTGCTGGTGT TCTGACCCAA TTTGCTGATT TTTCCAGCTT TTTTGGTGAA
CTATATATTC ACTTTGGGAC TGCGGAACCT TGGGTGATAT ATCCTGATGT TGTGCAATCC
TTAAGCAATT GGCAACATAT AGGAATTGAA TTAGGCGTTT TGTCTAATTT TGATTCACGG
CTGTACTCAG TTTTGCAAAG CTTAGGTTTG AGTCACTACT TTTCTTCGGT AACTATTTCC
ACTCAAGTAG GTGCAGCAAA ACCTGATCCC AAAATTTTTG CGATCGCTCT AGAAAAACAT
AATAGTTCTC CTGAAGAGGC ATGGCACATT GGCGATAGCA TTGAAGAAGA TTATCAAGGA
GCAAAAGCAG CCGGGTTAAG AGGTGTTTGG ATTAATCGAG AGAAAAGTTA TAACTGA
 
Protein sequence
MERPKVIFVD AVGTLFGVKG SVGKVYSQIA QEFGVEVAPD IVDKAFMESF KASPPPIFPD 
ADAEDIPQRE FEWWRRIALN TFESAGVLTQ FADFSSFFGE LYIHFGTAEP WVIYPDVVQS
LSNWQHIGIE LGVLSNFDSR LYSVLQSLGL SHYFSSVTIS TQVGAAKPDP KIFAIALEKH
NSSPEEAWHI GDSIEEDYQG AKAAGLRGVW INREKSYN