| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1687 |
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| Symbol | |
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| ID | 8381797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1820918 |
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| End bp | 1821664 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004439 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003161636 |
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| Protein GI | 256832909 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0106556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTGC CTGAGAACAC CAAAGGCGTC CTGCTTGATG TTGACGACAC ACTCGTTGAC
ACGCGGGGCG CCTTTGCGCA TGCCATGGGC GCGATCGCGG ATGAGTACTT CCCGCATCTT
CCTGGTGAAC GACACGGTGA TGTGCTGGCC ATGTGGCGCG CTGACCGCAA CGGTTTTTAC
CGTGCGTACA CGCAAGGGCG CCTGAGTGAG CAGCAGCAGC GCCGGGCACG TGCTGAGGAA
TTGCATGCCG CGTTTGGTGG CCCAATGATC ACTGACCGAC TCTACGCGGA ATGGGAAGAG
CTGTTCATGG TGGCGTTTGC TGCCGGGTGG GCACCATTTC CTGAGGTTGA CGCTGTGCTG
GCGGATTTCT CTGAGCGCGG CCTTGCAGTG GGCGCGGTGA CGAACGCAAA CCAGTCGATG
CAAACTCGGA AGTTGCGTGC ATGCGGGCTG GACGACGTCC CGCTCCTTGT GACGCTCGAC
ACTTTTGGTG TGGGGAAACC TGACCCCCGC GTGTTCCTCG AGGCAACCCG CCTGCTTGGA
CTTTCGGCGG AGAACACAGT GTATGTCGGC GACGAACTTG ATATCGATGC GCATGGTGCG
CAGCGAGCAG GTCTTACTGG GGTGTGGCTT GACCGCCCAG GGGCCCGGCG AGGCGGGTCA
CACACTGAAG GACGTGACCG TGCGGTGGCG TTGGGGGTCT CGGTCATTAC GTCCCTGAAC
GAATTGCGTA CTGATCCTGG CAGGTGA
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| Protein sequence | MTLPENTKGV LLDVDDTLVD TRGAFAHAMG AIADEYFPHL PGERHGDVLA MWRADRNGFY
RAYTQGRLSE QQQRRARAEE LHAAFGGPMI TDRLYAEWEE LFMVAFAAGW APFPEVDAVL
ADFSERGLAV GAVTNANQSM QTRKLRACGL DDVPLLVTLD TFGVGKPDPR VFLEATRLLG
LSAENTVYVG DELDIDAHGA QRAGLTGVWL DRPGARRGGS HTEGRDRAVA LGVSVITSLN
ELRTDPGR
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