| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5842 |
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| Symbol | |
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| ID | 6247415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 350109 |
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| End bp | 350813 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642597551 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_001861953 |
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| Protein GI | 186470635 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCG AAAACACACG CCGCCCGTCG TGGCTGACCT TTGATTGCTA CGGCACGCTG
ATTCAATGGG ACGAAGGGCT GCAGAACGCC GTGTCCGCGA TCCTGGCAAG CAAGCACGCA
GCTGCCATCG ATCCTCGCAA GTTCATTGCC GTCTACGACC GTCACGAGCA TGCGCTCGAA
CAGACGCCGC CGCACCGCTC GTTTCGCGAG GTCGCGGGCG AGGCGCTGCG CATCGCGCTC
GAAGAATTCG ACCTGCACGC GGAGGTCAGC GACATCCGCC TGCTCACTGA GCGCATCTCC
GCGATGCCGC CCTTCCCTGA AGTGGTCGCC ACGCTGCATG CATTGAAGGA AGCCGGCTAC
CGGCTGTGCA TCGTGTCGAA CACCGACGAC GACGTGATTG CGGGCAACGT CGCGCAACTC
GGCGGCCATA TCGACCGCGT CATTACCGCG CAGCAGGCGG GCGCATACAA ACCCGACCGG
CGGCTTTTCG ACTATGCTCA CGAACAGCTC GGCGTCGCGT ATGACGACGT CGTGCATATC
TGCGCGAGCC CGCATCTGGA TCATGCGGCG GCGCGCGACA TCGGCTTTCG TTGCGTGTGG
ATCGATCGCG GCACGGGGCG CCAGCTCTTG CCGGACTACA CACCCGACGC GATTCTGGCG
ACGCTCGGCC AGGTGCCTCC GCTGTTCACG TCGCTCGGCT GGTGA
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| Protein sequence | MSLENTRRPS WLTFDCYGTL IQWDEGLQNA VSAILASKHA AAIDPRKFIA VYDRHEHALE
QTPPHRSFRE VAGEALRIAL EEFDLHAEVS DIRLLTERIS AMPPFPEVVA TLHALKEAGY
RLCIVSNTDD DVIAGNVAQL GGHIDRVITA QQAGAYKPDR RLFDYAHEQL GVAYDDVVHI
CASPHLDHAA ARDIGFRCVW IDRGTGRQLL PDYTPDAILA TLGQVPPLFT SLGW
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