| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0557 |
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| Symbol | |
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| ID | 3626343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 666699 |
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| End bp | 667406 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637699449 |
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| Product | haloacid dehalogenase-like hydrolase family protein |
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| Protein accession | YP_304118 |
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| Protein GI | 73668103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.262309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTTT TCTTTGACAT AGATGGTACT CTGTTGGATC ATAAAAGTGC AGAATTCACT
GGGGTAAAAT TATTTCACCA GAATTACCGA AATTTTTTTG GTATGGATTT TAATGAATTT
TATTCTATTT GGTGCAAATT ATCAGAAAAA CACTTTGAAA AATATTTAGC AAAAGAATGC
TCTTTTGAAG AGCAGCGAAT AGAGCGAATT AAAGAACTGT ATTTAGAACG AAATATTAAC
CTGGCAAGCG AAGAAGCACT TGAAGTATTT GATTACTATT TACGCAATTA TGAATTAAGC
TGGAAACCCT TTAATGATGT GATACCATGC TTGAAAAAAC TTTCAAAATT AAAAATGGGT
ATCATCAGTA ATGGCGATTT AGGGCAACAA AAATTAAAGC TAGATAAAAT GAAAATTTCT
CATTACTTTG TTGATATCAT AGCAGCAGGA GAATTTAATG TTTCAAAACC CCATACGGAA
ATATTTGAAA TTGCATGTAA AAGAAATGGT GAAGAACCAG AAAAATGCTT CTATGTTGGA
GACACCATCG AAACTGATAT TATACCATGT GAAAAAATTG GAATGAAAGG CATATGGATA
AATAGAAACA ACAAAACTTT GCAAAACAAA AACATTAAAA TTATTGTCTC ATTGAAAGAA
CTTGCCAATG TATTATACGA AAGTATGCCC CAATCCTTGG ATTATTGA
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| Protein sequence | MMVFFDIDGT LLDHKSAEFT GVKLFHQNYR NFFGMDFNEF YSIWCKLSEK HFEKYLAKEC
SFEEQRIERI KELYLERNIN LASEEALEVF DYYLRNYELS WKPFNDVIPC LKKLSKLKMG
IISNGDLGQQ KLKLDKMKIS HYFVDIIAAG EFNVSKPHTE IFEIACKRNG EEPEKCFYVG
DTIETDIIPC EKIGMKGIWI NRNNKTLQNK NIKIIVSLKE LANVLYESMP QSLDY
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