| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4215 |
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| Symbol | |
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| ID | 5060699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4779797 |
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| End bp | 4780477 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476476 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001161021 |
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| Protein GI | 145596724 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.842339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGAGG CGGTGTTGTG GGACGTCGAC GACACCCTCT TCGACTTCTC TGGCTCGGAC
CGGCGGGCGT TGTCGCAGCA CTTCCAGGCG GAGGGTCTAT CCGCCTCAGC GACGTCGTTC
GAGCGTTGGC AGCGGGCCAC CGAGGCTGCC TACGGTCGGT TGGCTGCTGG GGAGCTTACG
TACGAGGAGT GTCAGCGACA GCGGGTCAGT GGGTTCCTGG GGCGGACGCC GGACGACGTG
GAGGCGGACG CGTGGCTCCG GCGCTACACC GCGCTGTTCG AGCACGCGTG GACGGCGTTC
CCGGACGTCA CGGCGGCCCT TGCGGCGCTG CCGCACCGGC ACGGGATCCT GTCCAACTCC
AGCACCACGC ATCAGGAGCG CAGACTGACC GCCCTGGGAT TGCGGCACCA CTTCGAGGTG
CTGCTGTGTT CGGACCGACT TGCCCGGGCG AAGCCGGATC CCTCGGCGTT CCTGGCCGGC
TGCGGATCCC TCGGGTTGCC GCCGGAAGCG GTCGCCTACG TGGGTGACCA GTTGGACACG
GACGCAGTGG CCGCTCGCGA CGCGGGACTG GTCGGAATCT GGCTGGATCG CGCACGATCC
ACAGTGCCGG TGCCGGTGGG TGTGCACCGG ATCCCGAGCC TCGCTGATCT CCCCCGGCTG
CTTGCCTCGC TGAGTGGATG A
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| Protein sequence | MIEAVLWDVD DTLFDFSGSD RRALSQHFQA EGLSASATSF ERWQRATEAA YGRLAAGELT
YEECQRQRVS GFLGRTPDDV EADAWLRRYT ALFEHAWTAF PDVTAALAAL PHRHGILSNS
STTHQERRLT ALGLRHHFEV LLCSDRLARA KPDPSAFLAG CGSLGLPPEA VAYVGDQLDT
DAVAARDAGL VGIWLDRARS TVPVPVGVHR IPSLADLPRL LASLSG
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