Gene Sked_11020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11020 
Symbol 
ID8632738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1281890 
End bp1282714 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content74% 
IMG OID 
Producthaloacid dehalogenase superfamily enzyme, subfamily IA 
Protein accessionYP_003313882 
Protein GI269794427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGTG ACCTCGGCGT GACCGGCGTG ACCGACGGCC GTGCTCCGGA GGCTCTGCCG 
ACGGCGCAGG TGCTCTTCGA CGGTCGGGGT CCGCTCGACG GCGTCCTGTT CGACATCGAC
GACACCCTCG TCAACACCCG TGCCGCCTTC GGTGCGGCGA TGGACGGGAT CGCCCGGGTC
TACCTCTCGC ACCTGCCCGC CGAGCGGCTC GGCGAGGTGC TGGCGCTGTG GCGCCGGGAC
CCCGACGGTC ACTACCGCTC GTACACGCGC GGCGAGGTGA CGCTCGACGA GCAGCGTCGC
CGTCGTGCGA ACCAGCTGCA GGAGGCCTTC GGTGCGCCGC CCCTCACGGA GGAGGAGTTC
GTCGCCTGGG ACGAGGTCTT CGACGCCTCG TACCGGGCGG GCTGGGCTGC GCACGACGAC
GCGGTCGACG CGGTCGCTGC CGTGTCGGCC CTCGGCCTGC GGGTCGGGGC GCTGTCCAAC
GCGACGACCG AGCACCAGCT GCCCAAGCTC GAGGCGACGG GGCTCGGGCA CGTGCCGATG
CTCGTCGGGC TCGACACCTT CGGCTTCGGC AAGCCCGACC CGCGGGTGTT CCTCGAGGCC
TGCGCCCGGC TCGGCACGGA CCCGGCGCGC ACGCTCTACG TCGGTGACGA GCTCGACCTC
GACGCGCGGG CCGCGGTGCG TGCCGGGCTG TTCGGCGCGT GGCTCGACCG TCCGGGCACC
CGTCGCGGGG GAGTGCACCA GGAGGACCCG CTGGCCGCGT CGGCCGACGG TGTCGTGGTG
CTGCAGGGGC TCGACGAGCT CACCGGGTAC CTGAAGACCG TCTGA
 
Protein sequence
MTGDLGVTGV TDGRAPEALP TAQVLFDGRG PLDGVLFDID DTLVNTRAAF GAAMDGIARV 
YLSHLPAERL GEVLALWRRD PDGHYRSYTR GEVTLDEQRR RRANQLQEAF GAPPLTEEEF
VAWDEVFDAS YRAGWAAHDD AVDAVAAVSA LGLRVGALSN ATTEHQLPKL EATGLGHVPM
LVGLDTFGFG KPDPRVFLEA CARLGTDPAR TLYVGDELDL DARAAVRAGL FGAWLDRPGT
RRGGVHQEDP LAASADGVVV LQGLDELTGY LKTV