291 homologs were found in PanDaTox collection
for query gene Amir_1299 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_1299  cell envelope-related transcriptional attenuator  100 
 
 
340 aa  671    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  43.64 
 
 
414 aa  261  1e-68  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  46.65 
 
 
512 aa  243  3e-63  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  37.97 
 
 
732 aa  207  3e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8771  cell envelope-related transcriptional attenuator  36.69 
 
 
547 aa  206  6e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.359858 
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  46.33 
 
 
382 aa  205  9e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1912  cell envelope-related transcriptional attenuator  38.92 
 
 
664 aa  201  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  38.84 
 
 
517 aa  199  3.9999999999999996e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  39.05 
 
 
522 aa  199  7e-50  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  38.94 
 
 
496 aa  187  2e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  37.62 
 
 
493 aa  186  5e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  39.42 
 
 
493 aa  184  2.0000000000000003e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  40 
 
 
497 aa  184  2.0000000000000003e-45  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  40.07 
 
 
490 aa  183  3e-45  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  40.07 
 
 
490 aa  183  3e-45  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  40.07 
 
 
490 aa  184  3e-45  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  37.05 
 
 
567 aa  182  9.000000000000001e-45  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  36.34 
 
 
514 aa  164  2.0000000000000002e-39  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  37.01 
 
 
410 aa  162  7e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  35.34 
 
 
538 aa  160  2e-38  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  37.6 
 
 
676 aa  149  6e-35  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  33.98 
 
 
521 aa  129  8.000000000000001e-29  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  32.08 
 
 
491 aa  107  3e-22  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  28.79 
 
 
549 aa  92  1e-17  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  27.58 
 
 
625 aa  91.7  1e-17  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3559  cell envelope-related transcriptional attenuator  34.22 
 
 
352 aa  90.5  4e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  0.153801  n/a   
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  32.42 
 
 
390 aa  90.1  4e-17  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  30.66 
 
 
512 aa  90.1  5e-17  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  27.07 
 
 
420 aa  88.6  1e-16  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  27.25 
 
 
486 aa  87.8  2e-16  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  28.72 
 
 
336 aa  88.2  2e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  32.16 
 
 
412 aa  87.4  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  27.48 
 
 
573 aa  84.3  0.000000000000002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  31.89 
 
 
509 aa  84  0.000000000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  29.52 
 
 
307 aa  83.2  0.000000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_009523  RoseRS_0249  cell envelope-related transcriptional attenuator  30.8 
 
 
461 aa  83.2  0.000000000000006  Roseiflexus sp. RS-1  Bacteria  normal  0.176246  normal  0.0400211 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  27.2 
 
 
530 aa  82.8  0.000000000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  27.34 
 
 
520 aa  82.4  0.00000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  29.18 
 
 
497 aa  81.3  0.00000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  28.51 
 
 
393 aa  81.6  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  28.63 
 
 
307 aa  80.9  0.00000000000003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_009953  Sare_5021  cell envelope-related transcriptional attenuator  31.38 
 
 
312 aa  80.5  0.00000000000004  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00237783 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  25.38 
 
 
468 aa  79.7  0.00000000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  27.94 
 
 
414 aa  79.3  0.00000000000008  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  28.41 
 
 
453 aa  79  0.0000000000001  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  29.55 
 
 
379 aa  77.8  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3186  cell envelope-related transcriptional attenuator  28 
 
 
451 aa  78.6  0.0000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.689692 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  27.01 
 
 
481 aa  78.2  0.0000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  27.33 
 
 
563 aa  77  0.0000000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  26.94 
 
 
618 aa  76.6  0.0000000000006  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_009380  Strop_4511  transcription attenuator LytR  28.57 
 
 
358 aa  76.3  0.0000000000007  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  30.25 
 
 
311 aa  74.7  0.000000000002  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  29.85 
 
 
505 aa  74.7  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  30.25 
 
 
311 aa  74.7  0.000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  30.25 
 
 
311 aa  74.7  0.000000000002  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  35.67 
 
 
560 aa  74.3  0.000000000003  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  31.15 
 
 
466 aa  74.3  0.000000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  29.81 
 
 
404 aa  73.9  0.000000000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  25.67 
 
 
487 aa  73.9  0.000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  26.05 
 
 
521 aa  73.6  0.000000000005  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  28.87 
 
 
407 aa  73.2  0.000000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  24.27 
 
 
540 aa  73.2  0.000000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  27.14 
 
 
516 aa  73.2  0.000000000007  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3034  cell envelope-related transcriptional attenuator  29.37 
 
 
379 aa  72.8  0.000000000008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.63975 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  27.07 
 
 
326 aa  72  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  36.52 
 
 
545 aa  72.4  0.00000000001  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  27.63 
 
 
320 aa  71.6  0.00000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  28.18 
 
 
306 aa  71.2  0.00000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  30.21 
 
 
353 aa  71.6  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  23.55 
 
 
478 aa  70.9  0.00000000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  24.24 
 
 
303 aa  70.5  0.00000000004  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  30.15 
 
 
396 aa  70.5  0.00000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_011772  BCG9842_B5566  membrane-bound transcriptional regulator LytR  24.81 
 
 
304 aa  70.5  0.00000000004  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1700  cell envelope-related transcriptional attenuator  29.54 
 
 
463 aa  69.7  0.00000000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.55383  normal 
 
 
-
 
NC_009513  Lreu_1352  cell envelope-related transcriptional attenuator  32.74 
 
 
488 aa  69.7  0.00000000008  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00278352  n/a   
 
 
-
 
NC_014151  Cfla_2384  cell envelope-related transcriptional attenuator  29.32 
 
 
303 aa  68.9  0.0000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.174416  hitchhiker  0.00797054 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  29.44 
 
 
520 aa  69.3  0.0000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_010816  BLD_0762  transcriptional regulator  26.39 
 
 
489 aa  68.9  0.0000000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  36.84 
 
 
584 aa  68.6  0.0000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20880  cell envelope-related function transcriptional attenuator common domain  28.29 
 
 
296 aa  68.6  0.0000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  30.29 
 
 
463 aa  68.2  0.0000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  24.81 
 
 
506 aa  67.8  0.0000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  27.83 
 
 
684 aa  67.8  0.0000000002  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  25.65 
 
 
304 aa  67  0.0000000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  28 
 
 
377 aa  67.4  0.0000000004  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  27.91 
 
 
302 aa  66.6  0.0000000005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  27.8 
 
 
409 aa  67  0.0000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  22.07 
 
 
432 aa  66.6  0.0000000006  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  23.78 
 
 
303 aa  66.6  0.0000000006  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  23.78 
 
 
303 aa  66.6  0.0000000006  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  27.39 
 
 
504 aa  66.2  0.0000000007  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  26.86 
 
 
395 aa  66.2  0.0000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  27.55 
 
 
480 aa  66.2  0.0000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  26.52 
 
 
394 aa  65.9  0.000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  26.09 
 
 
481 aa  65.9  0.000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  23.78 
 
 
303 aa  65.9  0.000000001  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_013521  Sked_08560  cell envelope-related function transcriptional attenuator common domain protein  26.7 
 
 
434 aa  65.1  0.000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.511519  normal  0.633257 
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  28.49 
 
 
304 aa  65.5  0.000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  23.75 
 
 
382 aa  65.9  0.000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A3613  transcription antiterminator, LytR family  24.74 
 
 
345 aa  65.9  0.000000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000276906  n/a   
 
 
-
 
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