More than 300 homologs were found in PanDaTox collection
for query gene Tpau_1296 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_1296  cell envelope-related transcriptional attenuator  100 
 
 
414 aa  840    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13519  hypothetical protein  61.45 
 
 
512 aa  419  1e-116  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.100718 
 
 
-
 
NC_013131  Caci_8771  cell envelope-related transcriptional attenuator  43.51 
 
 
547 aa  296  5e-79  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.359858 
 
 
-
 
NC_013131  Caci_7119  cell envelope-related transcriptional attenuator  49.15 
 
 
382 aa  290  3e-77  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  41.48 
 
 
522 aa  287  2e-76  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013131  Caci_1912  cell envelope-related transcriptional attenuator  43.91 
 
 
664 aa  283  3.0000000000000004e-75  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1299  cell envelope-related transcriptional attenuator  43.48 
 
 
340 aa  259  5.0000000000000005e-68  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  40.11 
 
 
732 aa  249  5e-65  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  38.84 
 
 
567 aa  243  7e-63  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  40.4 
 
 
538 aa  233  4.0000000000000004e-60  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  36.71 
 
 
410 aa  226  6e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6348  cell envelope-related transcriptional attenuator  41.74 
 
 
517 aa  225  9e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.352796  n/a   
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  39.04 
 
 
497 aa  218  1e-55  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_013159  Svir_06070  cell envelope-related function transcriptional attenuator common domain protein  38.58 
 
 
514 aa  215  9.999999999999999e-55  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.974325  normal  0.0563121 
 
 
-
 
NC_008726  Mvan_1726  cell envelope-related transcriptional attenuator  38.51 
 
 
493 aa  213  3.9999999999999995e-54  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4737  cell envelope-related transcriptional attenuator  39.7 
 
 
493 aa  213  3.9999999999999995e-54  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.440107  normal 
 
 
-
 
NC_013235  Namu_4212  cell envelope-related transcriptional attenuator  36.73 
 
 
496 aa  212  7.999999999999999e-54  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.134321 
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  37.85 
 
 
490 aa  209  1e-52  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  37.85 
 
 
490 aa  209  1e-52  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  37.85 
 
 
490 aa  209  1e-52  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  39.53 
 
 
676 aa  201  1.9999999999999998e-50  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4335  cell envelope-related transcriptional attenuator  37.54 
 
 
521 aa  180  2.9999999999999997e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0591559  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  31.09 
 
 
491 aa  159  1e-37  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  28.88 
 
 
618 aa  127  5e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_013093  Amir_3559  cell envelope-related transcriptional attenuator  33.89 
 
 
352 aa  125  2e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.153801  n/a   
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  28.21 
 
 
486 aa  121  3e-26  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  29.62 
 
 
549 aa  118  9.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  30.48 
 
 
468 aa  119  9.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  28.62 
 
 
506 aa  117  3e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  27.56 
 
 
509 aa  117  3e-25  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  29.47 
 
 
468 aa  117  3.9999999999999997e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  29.5 
 
 
512 aa  117  5e-25  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  29.72 
 
 
481 aa  117  5e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  28.92 
 
 
625 aa  115  1.0000000000000001e-24  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  28.53 
 
 
497 aa  114  3e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  28.62 
 
 
390 aa  113  5e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  31.17 
 
 
481 aa  111  2.0000000000000002e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  32.13 
 
 
393 aa  111  2.0000000000000002e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  30.66 
 
 
336 aa  111  2.0000000000000002e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  28.62 
 
 
573 aa  110  3e-23  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  29.87 
 
 
643 aa  110  4.0000000000000004e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  26.55 
 
 
684 aa  109  1e-22  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  28.92 
 
 
520 aa  108  1e-22  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  26.25 
 
 
414 aa  108  2e-22  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  30.04 
 
 
395 aa  108  2e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  26.79 
 
 
420 aa  108  2e-22  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  24.93 
 
 
395 aa  107  3e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  26.88 
 
 
504 aa  107  4e-22  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  28.71 
 
 
520 aa  107  4e-22  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  27.02 
 
 
487 aa  106  7e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  28.01 
 
 
545 aa  106  1e-21  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  27.44 
 
 
379 aa  105  2e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  25.07 
 
 
521 aa  105  2e-21  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  27.16 
 
 
400 aa  105  2e-21  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  27.41 
 
 
540 aa  104  3e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  26.83 
 
 
530 aa  104  3e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  25.73 
 
 
453 aa  104  3e-21  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  30.85 
 
 
362 aa  103  4e-21  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  26.56 
 
 
505 aa  103  5e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  26.07 
 
 
584 aa  103  6e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  27.05 
 
 
560 aa  102  1e-20  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  27.25 
 
 
699 aa  102  1e-20  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  27.25 
 
 
699 aa  102  1e-20  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  27.25 
 
 
701 aa  102  1e-20  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  27.81 
 
 
311 aa  102  2e-20  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  27.81 
 
 
311 aa  101  3e-20  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  27.81 
 
 
311 aa  101  3e-20  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  27.08 
 
 
377 aa  99.8  9e-20  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  26.64 
 
 
649 aa  99.4  1e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  27.61 
 
 
320 aa  99.4  1e-19  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_08920  cell envelope-related function transcriptional attenuator common domain protein  26.48 
 
 
381 aa  97.4  4e-19  Micrococcus luteus NCTC 2665  Bacteria  normal  0.667016  n/a   
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  26.27 
 
 
409 aa  97.1  5e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  23.4 
 
 
478 aa  96.7  7e-19  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  29.55 
 
 
349 aa  96.3  8e-19  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  27.16 
 
 
365 aa  96.7  8e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  29.44 
 
 
307 aa  95.1  2e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  27.12 
 
 
307 aa  95.5  2e-18  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_014151  Cfla_3214  cell envelope-related transcriptional attenuator  30.96 
 
 
443 aa  94.4  3e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.00000235319 
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  28.81 
 
 
326 aa  94.4  3e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  27.46 
 
 
687 aa  94.7  3e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  27.66 
 
 
417 aa  94.4  4e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  25.66 
 
 
499 aa  93.2  7e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  31.17 
 
 
389 aa  93.2  7e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  27.08 
 
 
551 aa  93.2  8e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  26.62 
 
 
404 aa  93.2  8e-18  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  29.79 
 
 
406 aa  93.2  8e-18  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  26.77 
 
 
442 aa  92.8  1e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  26.2 
 
 
516 aa  92.4  1e-17  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3034  cell envelope-related transcriptional attenuator  27.03 
 
 
379 aa  91.7  2e-17  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.63975 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  28.27 
 
 
526 aa  91.7  2e-17  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  29.73 
 
 
407 aa  91.7  2e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_013174  Jden_1865  cell envelope-related transcriptional attenuator  28.52 
 
 
434 aa  90.5  5e-17  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0368682 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  27.78 
 
 
466 aa  90.5  5e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0589  putative transcriptional regulator  29.83 
 
 
498 aa  90.1  6e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.581304 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  29.63 
 
 
306 aa  90.1  7e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  27.13 
 
 
734 aa  88.2  3e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0287  cell envelope-related transcriptional attenuator  30.4 
 
 
412 aa  88.2  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  27.3 
 
 
619 aa  87.4  4e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  26.59 
 
 
463 aa  87.4  4e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  24.83 
 
 
480 aa  87  6e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
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