More than 300 homologs were found in PanDaTox collection
for query gene Tcr_0077 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_0077  methyl-accepting chemotaxis sensory transducer  100 
 
 
941 aa  1917    Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.000232315  n/a   
 
 
-
 
NC_007520  Tcr_1897  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.6 
 
 
1170 aa  525  1e-147  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0027  methyl-accepting chemotaxis sensory transducer  31.56 
 
 
959 aa  370  1e-101  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1984  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  31.74 
 
 
954 aa  348  2e-94  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0777  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
712 aa  322  1.9999999999999998e-86  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0553  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.44 
 
 
888 aa  298  3e-79  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0361  methyl-accepting chemotaxis sensory transducer  34.13 
 
 
601 aa  279  2e-73  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0574  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
815 aa  279  2e-73  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  47.39 
 
 
610 aa  265  2e-69  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
755 aa  264  6e-69  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  37 
 
 
740 aa  264  6e-69  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3497  putative methyl-accepting chemotaxis sensory transducer  42.12 
 
 
860 aa  263  1e-68  Shewanella amazonensis SB2B  Bacteria  normal  0.19961  normal 
 
 
-
 
NC_009831  Ssed_0184  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  47.02 
 
 
863 aa  262  3e-68  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  32.04 
 
 
752 aa  261  5.0000000000000005e-68  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007912  Sde_3105  putative methyl-accepting chemotaxis sensory transducer  42.35 
 
 
767 aa  260  7e-68  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  33.15 
 
 
705 aa  259  2e-67  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  46.03 
 
 
1123 aa  255  2.0000000000000002e-66  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  32.35 
 
 
753 aa  255  3e-66  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  31.37 
 
 
733 aa  255  3e-66  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0111  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.61 
 
 
864 aa  254  5.000000000000001e-66  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0151  methyl-accepting chemotaxis protein  42.94 
 
 
678 aa  254  6e-66  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
745 aa  254  7e-66  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_007520  Tcr_1394  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
840 aa  253  9.000000000000001e-66  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  43.65 
 
 
797 aa  253  2e-65  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_011071  Smal_3537  methyl-accepting chemotaxis sensory transducer  33.8 
 
 
843 aa  248  4e-64  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3896  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
706 aa  239  1e-61  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.337027  normal  0.882129 
 
 
-
 
NC_012848  Rleg_5166  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
669 aa  238  4e-61  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  43.09 
 
 
793 aa  238  6e-61  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_011071  Smal_3007  methyl-accepting chemotaxis sensory transducer  33.55 
 
 
707 aa  237  7e-61  Stenotrophomonas maltophilia R551-3  Bacteria  normal  decreased coverage  0.00177393 
 
 
-
 
NC_007298  Daro_0729  PAS  40.29 
 
 
945 aa  235  2.0000000000000002e-60  Dechloromonas aromatica RCB  Bacteria  normal  0.0635035  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  41.88 
 
 
566 aa  235  3e-60  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_011989  Avi_3714  methyl-accepting chemotaxis protein  37.08 
 
 
679 aa  235  3e-60  Agrobacterium vitis S4  Bacteria  normal  0.0885803  n/a   
 
 
-
 
NC_008463  PA14_02220  putative chemotaxis transducer  40.23 
 
 
679 aa  234  4.0000000000000004e-60  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.329962  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  41.31 
 
 
583 aa  234  5e-60  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011094  SeSA_A4786  methyl-accepting chemotaxis protein I  42.23 
 
 
553 aa  233  9e-60  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.709187  normal 
 
 
-
 
NC_009636  Smed_0082  methyl-accepting chemotaxis sensory transducer  38.91 
 
 
665 aa  233  9e-60  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3926  methyl-accepting chemotaxis sensory transducer with Cache sensor  50 
 
 
665 aa  232  2e-59  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_0256  chemotaxis transducer  40.97 
 
 
679 aa  232  2e-59  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1002  methyl-accepting chemotaxis protein-like protein  32.69 
 
 
1100 aa  232  2e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3993  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.19 
 
 
701 aa  232  3e-59  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.311816 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  40.92 
 
 
552 aa  232  3e-59  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  40.58 
 
 
562 aa  232  3e-59  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_011080  SNSL254_A4887  methyl-accepting chemotaxis protein I  41.89 
 
 
553 aa  231  3e-59  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4939  methyl-accepting chemotaxis protein I  41.89 
 
 
553 aa  231  3e-59  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.188217  normal 
 
 
-
 
NC_011205  SeD_A4946  methyl-accepting chemotaxis protein I  41.89 
 
 
553 aa  232  3e-59  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.556415 
 
 
-
 
NC_009436  Ent638_0513  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
586 aa  231  4e-59  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00498581 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
598 aa  231  4e-59  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  42.56 
 
 
775 aa  231  5e-59  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_010717  PXO_00045  chemotaxis protein  33.76 
 
 
691 aa  230  8e-59  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.505093  n/a   
 
 
-
 
NC_010338  Caul_0276  methyl-accepting chemotaxis sensory transducer  42.66 
 
 
657 aa  230  9e-59  Caulobacter sp. K31  Bacteria  normal  0.461968  normal  0.560518 
 
 
-
 
NC_012850  Rleg_0098  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
665 aa  230  1e-58  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.713215  normal 
 
 
-
 
NC_010086  Bmul_4997  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
620 aa  229  2e-58  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.245568 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  42.51 
 
 
527 aa  229  2e-58  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  44.93 
 
 
591 aa  228  3e-58  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  42.81 
 
 
573 aa  228  3e-58  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
642 aa  228  3e-58  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_007298  Daro_0728  histidine kinase, HAMP region: chemotaxis sensory transducer  38.08 
 
 
792 aa  228  4e-58  Dechloromonas aromatica RCB  Bacteria  normal  0.066629  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  42.76 
 
 
542 aa  228  4e-58  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
569 aa  228  4e-58  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
620 aa  228  4e-58  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
620 aa  228  4e-58  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  44.93 
 
 
591 aa  228  4e-58  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_011989  Avi_0793  methyl-accepting chemotaxis protein  39.26 
 
 
740 aa  228  5.0000000000000005e-58  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5471  methyl-accepting chemotaxis sensory transducer  43.66 
 
 
620 aa  228  5.0000000000000005e-58  Burkholderia ambifaria AMMD  Bacteria  normal  0.407039  normal 
 
 
-
 
NC_012917  PC1_3679  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
567 aa  227  6e-58  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  43.56 
 
 
661 aa  227  6e-58  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3443  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
511 aa  227  7e-58  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.330959  n/a   
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  41.55 
 
 
580 aa  227  7e-58  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  43.56 
 
 
661 aa  227  8e-58  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  45.67 
 
 
617 aa  227  9e-58  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  42.56 
 
 
585 aa  227  9e-58  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_010552  BamMC406_3618  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
620 aa  226  1e-57  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0344374  normal 
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.51 
 
 
610 aa  227  1e-57  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_006349  BMAA1872  methyl-accepting chemotaxis protein  43.56 
 
 
542 aa  227  1e-57  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  43.56 
 
 
542 aa  227  1e-57  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  43.56 
 
 
542 aa  227  1e-57  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
584 aa  226  1e-57  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  43.56 
 
 
542 aa  226  1e-57  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  43.61 
 
 
618 aa  226  1e-57  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  46.51 
 
 
618 aa  226  1e-57  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  43.56 
 
 
563 aa  227  1e-57  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
549 aa  226  2e-57  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  43.11 
 
 
620 aa  226  2e-57  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_011989  Avi_1159  methyl-accepting chemotaxis protein  38.79 
 
 
671 aa  225  2e-57  Agrobacterium vitis S4  Bacteria  normal  0.573311  n/a   
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
578 aa  225  2e-57  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.67 
 
 
609 aa  226  2e-57  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
596 aa  226  2e-57  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.01 
 
 
598 aa  225  2e-57  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  44.65 
 
 
567 aa  226  2e-57  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  44.61 
 
 
592 aa  225  2e-57  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.67 
 
 
608 aa  226  2e-57  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_0006  methyl-accepting chemotaxis sensory transducer with Cache sensor  48.77 
 
 
667 aa  226  2e-57  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  45.24 
 
 
659 aa  225  3e-57  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
580 aa  225  3e-57  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  42.8 
 
 
666 aa  225  4e-57  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_013421  Pecwa_3873  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
575 aa  224  4e-57  Pectobacterium wasabiae WPP163  Bacteria  normal  0.460221  n/a   
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  43.14 
 
 
581 aa  224  4.9999999999999996e-57  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_012912  Dd1591_1804  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
562 aa  224  4.9999999999999996e-57  Dickeya zeae Ech1591  Bacteria  normal  0.0522685  n/a   
 
 
-
 
NC_012880  Dd703_2175  methyl-accepting chemotaxis sensory transducer  39.47 
 
 
530 aa  224  6e-57  Dickeya dadantii Ech703  Bacteria  normal  0.746333  n/a   
 
 
-
 
NC_007952  Bxe_B0129  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
511 aa  224  6e-57  Burkholderia xenovorans LB400  Bacteria  normal  0.469561  normal 
 
 
-
 
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