More than 300 homologs were found in PanDaTox collection
for query gene Strop_1952 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_1952  regulatory protein, LuxR  100 
 
 
96 aa  191  4e-48  Salinispora tropica CNB-440  Bacteria  normal  0.801604  normal  0.129884 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  57.45 
 
 
241 aa  91.7  3e-18  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  55.32 
 
 
217 aa  90.9  5e-18  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  50.54 
 
 
229 aa  88.2  3e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  54.26 
 
 
245 aa  88.6  3e-17  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  52.13 
 
 
226 aa  87.8  4e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_2268  two component LuxR family transcriptional regulator  72.41 
 
 
250 aa  86.3  1e-16  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00478344  normal  0.0390494 
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  48.94 
 
 
230 aa  86.3  1e-16  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  52.63 
 
 
232 aa  85.9  2e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  53.19 
 
 
228 aa  84.7  4e-16  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  53.19 
 
 
215 aa  84  6e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  54.84 
 
 
221 aa  82.8  0.000000000000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  52.13 
 
 
230 aa  81.6  0.000000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  52.13 
 
 
214 aa  81.6  0.000000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.81 
 
 
222 aa  81.3  0.000000000000004  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  50 
 
 
229 aa  81.3  0.000000000000004  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  52.13 
 
 
227 aa  80.5  0.000000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  50.51 
 
 
225 aa  79  0.00000000000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  53.19 
 
 
216 aa  79  0.00000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  50 
 
 
219 aa  79.3  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  48.45 
 
 
229 aa  78.6  0.00000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  44.68 
 
 
235 aa  76.6  0.0000000000001  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  47.87 
 
 
215 aa  75.9  0.0000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0780809 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  50 
 
 
222 aa  75.1  0.0000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  48.39 
 
 
218 aa  75.1  0.0000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  45.26 
 
 
223 aa  74.7  0.0000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  59.02 
 
 
222 aa  73.9  0.0000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.67 
 
 
219 aa  73.9  0.0000000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  44.68 
 
 
222 aa  73.9  0.0000000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  47.37 
 
 
222 aa  73.9  0.0000000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  43.62 
 
 
225 aa  73.6  0.0000000000008  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  45.74 
 
 
220 aa  73.2  0.000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  44.68 
 
 
213 aa  72.4  0.000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  47.87 
 
 
215 aa  71.2  0.000000000004  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  43.16 
 
 
241 aa  70.9  0.000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  53.12 
 
 
215 aa  70.9  0.000000000005  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  45.74 
 
 
217 aa  70.5  0.000000000007  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  38.71 
 
 
234 aa  70.5  0.000000000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  48.39 
 
 
218 aa  70.5  0.000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  40.43 
 
 
215 aa  69.7  0.00000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.48 
 
 
216 aa  69.7  0.00000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.63 
 
 
244 aa  69.7  0.00000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  43.16 
 
 
215 aa  69.7  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  55.17 
 
 
220 aa  70.1  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  42.86 
 
 
239 aa  70.1  0.00000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  42.57 
 
 
231 aa  69.7  0.00000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  43.62 
 
 
221 aa  69.7  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_0232  response regulator receiver protein  47.87 
 
 
213 aa  69.7  0.00000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  39.78 
 
 
231 aa  69.7  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  60 
 
 
218 aa  69.7  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  49.46 
 
 
213 aa  68.9  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2494  two component transcriptional regulator, LuxR family  42.22 
 
 
208 aa  69.3  0.00000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.890127  n/a   
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  45.74 
 
 
219 aa  69.3  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  44.21 
 
 
224 aa  68.9  0.00000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  43.62 
 
 
215 aa  68.9  0.00000000002  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.4 
 
 
247 aa  69.3  0.00000000002  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  47.14 
 
 
215 aa  69.3  0.00000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  43.75 
 
 
222 aa  68.9  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_012669  Bcav_0296  two component transcriptional regulator, LuxR family  46.81 
 
 
198 aa  68.9  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.1736  normal 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  51.56 
 
 
218 aa  68.9  0.00000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  40.43 
 
 
225 aa  68.6  0.00000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013093  Amir_2811  two component transcriptional regulator, LuxR family  45.16 
 
 
217 aa  67.8  0.00000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206772  n/a   
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  41.49 
 
 
222 aa  67.8  0.00000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013595  Sros_7377  response regulator receiver protein  38.3 
 
 
216 aa  67.8  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.92051  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  40.86 
 
 
229 aa  67.4  0.00000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_0607  two component transcriptional regulator, LuxR family  37.89 
 
 
216 aa  67.4  0.00000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  39.8 
 
 
214 aa  67.4  0.00000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.63 
 
 
236 aa  67.4  0.00000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  44.09 
 
 
225 aa  67  0.00000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013172  Bfae_02400  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.81 
 
 
255 aa  67  0.00000000007  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  43.62 
 
 
216 aa  67  0.00000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  46.81 
 
 
219 aa  67  0.00000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  43.48 
 
 
233 aa  67  0.00000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013947  Snas_3639  two component transcriptional regulator, LuxR family  39.78 
 
 
215 aa  66.2  0.0000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.274763  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  44.09 
 
 
226 aa  66.2  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  37.63 
 
 
225 aa  66.6  0.0000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  44.21 
 
 
221 aa  66.6  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  45.16 
 
 
249 aa  66.2  0.0000000001  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.36 
 
 
261 aa  66.6  0.0000000001  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  48.94 
 
 
220 aa  66.6  0.0000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  33.33 
 
 
218 aa  66.6  0.0000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  39.36 
 
 
242 aa  66.6  0.0000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  39.78 
 
 
247 aa  66.6  0.0000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  38.3 
 
 
224 aa  65.5  0.0000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013947  Snas_3676  two component transcriptional regulator, LuxR family  41.57 
 
 
214 aa  65.5  0.0000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0625047  normal  0.0780809 
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  51.67 
 
 
233 aa  65.5  0.0000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013595  Sros_4115  response regulator receiver protein  56.14 
 
 
216 aa  65.9  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.071707  normal  0.0608108 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  41.49 
 
 
226 aa  66.2  0.0000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  39.36 
 
 
239 aa  65.5  0.0000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  42.55 
 
 
227 aa  65.9  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  43.75 
 
 
220 aa  65.9  0.0000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  42.11 
 
 
226 aa  65.9  0.0000000002  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  42.39 
 
 
215 aa  65.5  0.0000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  40.86 
 
 
226 aa  65.1  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  44.68 
 
 
228 aa  65.1  0.0000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013757  Gobs_0156  two component transcriptional regulator, LuxR family  42.22 
 
 
230 aa  65.1  0.0000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.379873  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  42.55 
 
 
226 aa  64.7  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  39.58 
 
 
224 aa  64.7  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  43.16 
 
 
229 aa  64.7  0.0000000004  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  41.49 
 
 
224 aa  64.7  0.0000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
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