More than 300 homologs were found in PanDaTox collection
for query gene Rpic12D_4162 on replicon NC_012857
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RSp1406  methyl-accepting chemotaxis I  74.51 
 
 
608 aa  810    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  100 
 
 
615 aa  1216    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  100 
 
 
615 aa  1216    Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  61.05 
 
 
600 aa  543  1e-153  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  60.35 
 
 
608 aa  525  1e-148  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  60.35 
 
 
608 aa  525  1e-148  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
522 aa  476  1e-133  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  56.34 
 
 
522 aa  476  1e-133  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_007348  Reut_B5597  methyl-accepting chemotaxis sensory transducer  51.92 
 
 
570 aa  469  1.0000000000000001e-131  Ralstonia eutropha JMP134  Bacteria  normal  0.253624  n/a   
 
 
-
 
NC_007974  Rmet_3678  methyl-accepting chemotaxis sensory transducer  54.65 
 
 
605 aa  452  1.0000000000000001e-126  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.12372 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  58.27 
 
 
524 aa  446  1.0000000000000001e-124  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  51.33 
 
 
513 aa  447  1.0000000000000001e-124  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_003296  RSp0303  methyl-accepting chemotaxis transmembrane protein  53.61 
 
 
515 aa  441  9.999999999999999e-123  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0248188 
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  51.84 
 
 
513 aa  436  1e-121  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  49.56 
 
 
572 aa  434  1e-120  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  51.84 
 
 
601 aa  428  1e-118  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  75.7 
 
 
515 aa  420  1e-116  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  75.39 
 
 
515 aa  419  1e-116  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  75.38 
 
 
515 aa  418  9.999999999999999e-116  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  47.33 
 
 
588 aa  419  9.999999999999999e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_010681  Bphyt_3813  methyl-accepting chemotaxis sensory transducer  47.21 
 
 
617 aa  418  9.999999999999999e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
535 aa  418  9.999999999999999e-116  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0121  methyl-accepting chemotaxis sensory transducer  44.96 
 
 
618 aa  415  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.487659 
 
 
-
 
NC_007951  Bxe_A2023  methyl-accepting chemotaxis sensory transducer  47.78 
 
 
538 aa  414  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  0.205381  normal 
 
 
-
 
NC_010681  Bphyt_2245  methyl-accepting chemotaxis sensory transducer  47.66 
 
 
524 aa  415  1e-114  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2494  methyl-accepting chemotaxis sensory transducer  50.39 
 
 
514 aa  413  1e-114  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1232  methyl-accepting chemotaxis sensory transducer  51.09 
 
 
595 aa  410  1e-113  Burkholderia phymatum STM815  Bacteria  normal  0.0384777  normal  0.175298 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  45.25 
 
 
596 aa  408  1.0000000000000001e-112  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  61.21 
 
 
634 aa  406  1.0000000000000001e-112  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  61.21 
 
 
634 aa  406  1.0000000000000001e-112  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A2020  histidine kinase, HAMP region: chemotaxis sensory transducer  49.59 
 
 
521 aa  403  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1464  methyl-accepting chemotaxis protein  50.29 
 
 
518 aa  398  1e-109  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2470  methyl-accepting chemotaxis protein  51.54 
 
 
616 aa  397  1e-109  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  50.37 
 
 
513 aa  398  1e-109  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  79.43 
 
 
513 aa  393  1e-108  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_008390  Bamb_0171  methyl-accepting chemotaxis sensory transducer  45.73 
 
 
648 aa  392  1e-108  Burkholderia ambifaria AMMD  Bacteria  normal  0.451768  n/a   
 
 
-
 
NC_010508  Bcenmc03_1588  methyl-accepting chemotaxis sensory transducer  51.66 
 
 
588 aa  394  1e-108  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.834305  normal 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  80.51 
 
 
513 aa  392  1e-107  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  80.51 
 
 
513 aa  392  1e-107  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010084  Bmul_0167  methyl-accepting chemotaxis sensory transducer  45.18 
 
 
659 aa  391  1e-107  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.677561 
 
 
-
 
NC_010551  BamMC406_0184  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
648 aa  389  1e-107  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_1872  methyl-accepting chemotaxis protein  51.02 
 
 
626 aa  387  1e-106  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  62.7 
 
 
513 aa  387  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2024  methyl-accepting chemotaxis protein I  51.02 
 
 
634 aa  389  1e-106  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2534  methyl-accepting chemotaxis protein  49.9 
 
 
518 aa  386  1e-106  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1358  methyl-accepting chemotaxis protein  49.9 
 
 
518 aa  386  1e-106  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  47.49 
 
 
583 aa  386  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1280  methyl-accepting chemotaxis protein  49.9 
 
 
518 aa  386  1e-106  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
589 aa  386  1e-106  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_009074  BURPS668_1859  methyl-accepting chemotaxis protein  50.84 
 
 
621 aa  385  1e-105  Burkholderia pseudomallei 668  Bacteria  normal  0.674726  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  63.69 
 
 
559 aa  384  1e-105  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_008060  Bcen_1131  methyl-accepting chemotaxis sensory transducer  52.08 
 
 
588 aa  385  1e-105  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1611  methyl-accepting chemotaxis sensory transducer  52.08 
 
 
588 aa  385  1e-105  Burkholderia cenocepacia HI2424  Bacteria  normal  0.542582  n/a   
 
 
-
 
NC_007510  Bcep18194_A3360  methyl-accepting chemotaxis sensory transducer  47.78 
 
 
655 aa  380  1e-104  Burkholderia sp. 383  Bacteria  normal  0.139099  normal 
 
 
-
 
NC_010515  Bcenmc03_5635  methyl-accepting chemotaxis sensory transducer  47.59 
 
 
519 aa  375  1e-103  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.264146  normal  0.57201 
 
 
-
 
NC_008784  BMASAVP1_0277  methyl-accepting chemotaxis protein  48.35 
 
 
530 aa  377  1e-103  Burkholderia mallei SAVP1  Bacteria  normal  0.121986  n/a   
 
 
-
 
NC_006349  BMAA1298  methyl-accepting chemotaxis protein  48.35 
 
 
530 aa  377  1e-103  Burkholderia mallei ATCC 23344  Bacteria  normal  0.09541  n/a   
 
 
-
 
NC_007348  Reut_B5602  methyl-accepting chemotaxis sensory transducer  62.47 
 
 
594 aa  377  1e-103  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1527  methyl-accepting chemotaxis sensory transducer  50.88 
 
 
587 aa  377  1e-103  Burkholderia ambifaria MC40-6  Bacteria  normal  0.512784  normal  0.576949 
 
 
-
 
NC_008835  BMA10229_0548  methyl-accepting chemotaxis protein  48.35 
 
 
530 aa  377  1e-103  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1158  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
519 aa  377  1e-103  Burkholderia sp. 383  Bacteria  normal  normal  0.220586 
 
 
-
 
NC_010508  Bcenmc03_0240  methyl-accepting chemotaxis sensory transducer  48.01 
 
 
657 aa  377  1e-103  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0244017  normal 
 
 
-
 
NC_008061  Bcen_3703  methyl-accepting chemotaxis sensory transducer  47.59 
 
 
519 aa  376  1e-103  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.627885  n/a   
 
 
-
 
NC_008391  Bamb_4055  methyl-accepting chemotaxis sensory transducer  48.26 
 
 
519 aa  379  1e-103  Burkholderia ambifaria AMMD  Bacteria  normal  0.242338  normal  0.634618 
 
 
-
 
NC_010552  BamMC406_4511  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
519 aa  377  1e-103  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4665  methyl-accepting chemotaxis sensory transducer  47.59 
 
 
519 aa  376  1e-103  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0344145  normal  0.449012 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  56.33 
 
 
578 aa  375  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010622  Bphy_2972  methyl-accepting chemotaxis sensory transducer  47.84 
 
 
597 aa  375  1e-102  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00113075 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  62.57 
 
 
559 aa  373  1e-102  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A4750  methyl-accepting chemotaxis sensory transducer  50.68 
 
 
612 aa  373  1e-102  Burkholderia sp. 383  Bacteria  normal  normal  0.445402 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  63.08 
 
 
587 aa  375  1e-102  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  51.26 
 
 
569 aa  375  1e-102  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2849  methyl-accepting chemotaxis sensory transducer  47.82 
 
 
659 aa  374  1e-102  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0258  methyl-accepting chemotaxis sensory transducer  47.82 
 
 
659 aa  374  1e-102  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.00414638  n/a   
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  66.37 
 
 
551 aa  371  1e-101  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  65.84 
 
 
586 aa  370  1e-101  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  65.5 
 
 
580 aa  370  1e-101  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  46.43 
 
 
579 aa  370  1e-101  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007952  Bxe_B2520  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
542 aa  369  1e-101  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.128174 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  67.97 
 
 
585 aa  370  1e-101  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  53.77 
 
 
581 aa  367  1e-100  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  55.52 
 
 
543 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6386  methyl-accepting chemotaxis sensory transducer  46.95 
 
 
542 aa  367  1e-100  Burkholderia phymatum STM815  Bacteria  normal  normal  0.864566 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  48.6 
 
 
559 aa  366  1e-100  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  45.04 
 
 
542 aa  368  1e-100  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  52.96 
 
 
589 aa  368  1e-100  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007951  Bxe_A4080  methyl-accepting chemotaxis sensory transducer  47.42 
 
 
549 aa  367  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0847  methyl-accepting chemotaxis sensory transducer  47.2 
 
 
516 aa  366  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.024141 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  53.77 
 
 
579 aa  366  1e-100  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  46.7 
 
 
549 aa  369  1e-100  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_010086  Bmul_4025  methyl-accepting chemotaxis sensory transducer  48.35 
 
 
519 aa  364  3e-99  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.987625  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.86 
 
 
584 aa  363  4e-99  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  63.29 
 
 
527 aa  363  5.0000000000000005e-99  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
577 aa  363  7.0000000000000005e-99  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_007974  Rmet_3683  methyl-accepting chemotaxis sensory transducer  49.05 
 
 
613 aa  362  8e-99  Cupriavidus metallidurans CH34  Bacteria  normal  0.755698  normal  0.0578518 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  59.07 
 
 
575 aa  362  9e-99  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  60.43 
 
 
584 aa  362  1e-98  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  45.63 
 
 
532 aa  362  1e-98  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  64.51 
 
 
558 aa  362  1e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  46.89 
 
 
520 aa  361  2e-98  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
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