More than 300 homologs were found in PanDaTox collection
for query gene Rfer_3610 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  66.93 
 
 
537 aa  635    Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  100 
 
 
511 aa  1000    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  57.68 
 
 
592 aa  506  9.999999999999999e-143  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  52.88 
 
 
596 aa  451  1e-125  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  51.84 
 
 
586 aa  449  1e-125  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  53.29 
 
 
578 aa  448  1.0000000000000001e-124  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  52.24 
 
 
552 aa  448  1.0000000000000001e-124  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  53.29 
 
 
580 aa  447  1.0000000000000001e-124  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  52.54 
 
 
583 aa  442  1e-123  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  51.8 
 
 
542 aa  436  1e-121  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  52.78 
 
 
589 aa  424  1e-117  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  69.44 
 
 
579 aa  407  1.0000000000000001e-112  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  51.54 
 
 
589 aa  407  1.0000000000000001e-112  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  47.34 
 
 
535 aa  400  9.999999999999999e-111  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  70.16 
 
 
471 aa  402  9.999999999999999e-111  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  49.33 
 
 
559 aa  400  9.999999999999999e-111  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  73.13 
 
 
578 aa  399  9.999999999999999e-111  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
557 aa  399  9.999999999999999e-111  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  46.71 
 
 
553 aa  396  1e-109  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  71.8 
 
 
598 aa  395  1e-109  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  67.41 
 
 
527 aa  395  1e-109  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  61.17 
 
 
537 aa  389  1e-107  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
554 aa  387  1e-106  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  48.47 
 
 
584 aa  387  1e-106  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  61.62 
 
 
659 aa  387  1e-106  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  47.05 
 
 
559 aa  383  1e-105  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  48.74 
 
 
532 aa  384  1e-105  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  46.7 
 
 
589 aa  384  1e-105  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  48.39 
 
 
532 aa  385  1e-105  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  60.47 
 
 
653 aa  379  1e-104  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  60.59 
 
 
579 aa  380  1e-104  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  60.47 
 
 
653 aa  380  1e-104  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  46.54 
 
 
573 aa  380  1e-104  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  43.95 
 
 
543 aa  378  1e-103  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  46.27 
 
 
586 aa  376  1e-103  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  58.39 
 
 
614 aa  373  1e-102  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  44.93 
 
 
572 aa  365  2e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  45.07 
 
 
520 aa  361  2e-98  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  43.8 
 
 
549 aa  361  2e-98  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  64.74 
 
 
642 aa  361  2e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  46.14 
 
 
569 aa  360  3e-98  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  67.68 
 
 
515 aa  359  6e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
553 aa  359  6e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  47.42 
 
 
536 aa  359  7e-98  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_010682  Rpic_2095  methyl-accepting chemotaxis sensory transducer  44.87 
 
 
520 aa  358  9.999999999999999e-98  Ralstonia pickettii 12J  Bacteria  normal  0.649492  normal  0.265934 
 
 
-
 
NC_013421  Pecwa_0105  methyl-accepting chemotaxis sensory transducer  42.69 
 
 
556 aa  358  9.999999999999999e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  45.75 
 
 
575 aa  358  1.9999999999999998e-97  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_012917  PC1_0111  methyl-accepting chemotaxis sensory transducer  42.88 
 
 
556 aa  357  2.9999999999999997e-97  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  53.02 
 
 
622 aa  357  2.9999999999999997e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  44.57 
 
 
513 aa  357  3.9999999999999996e-97  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
547 aa  355  7.999999999999999e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
584 aa  353  5.9999999999999994e-96  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  44.66 
 
 
513 aa  352  1e-95  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4495  methyl-accepting chemotaxis sensory transducer  43.98 
 
 
605 aa  351  2e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0928828 
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  48.09 
 
 
612 aa  350  4e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_012880  Dd703_1569  methyl-accepting chemotaxis sensory transducer  39.57 
 
 
554 aa  350  4e-95  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4301  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
587 aa  349  5e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2526  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
554 aa  348  2e-94  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  55.9 
 
 
650 aa  347  3e-94  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  41.73 
 
 
555 aa  347  3e-94  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  53.83 
 
 
577 aa  347  4e-94  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_008752  Aave_4446  methyl-accepting chemotaxis sensory transducer  43.27 
 
 
605 aa  346  5e-94  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0260008  normal  0.622584 
 
 
-
 
NC_010681  Bphyt_0409  methyl-accepting chemotaxis sensory transducer  42.3 
 
 
585 aa  345  8.999999999999999e-94  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  50.87 
 
 
595 aa  345  1e-93  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  43.52 
 
 
551 aa  345  1e-93  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1602  methyl-accepting chemotaxis sensory transducer  40.55 
 
 
554 aa  344  2e-93  Dickeya zeae Ech1591  Bacteria  normal  0.33331  n/a   
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  44.35 
 
 
548 aa  343  2.9999999999999997e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
559 aa  344  2.9999999999999997e-93  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2831  methyl-accepting chemotaxis sensory transducer  39.14 
 
 
554 aa  343  5e-93  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  52.93 
 
 
562 aa  343  5e-93  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
565 aa  342  7e-93  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  46.32 
 
 
567 aa  341  1e-92  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.45 
 
 
598 aa  341  2e-92  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
554 aa  340  2.9999999999999998e-92  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  43.6 
 
 
520 aa  340  4e-92  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_013421  Pecwa_0104  methyl-accepting chemotaxis sensory transducer  41.63 
 
 
548 aa  339  7e-92  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  42.64 
 
 
539 aa  339  8e-92  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_012912  Dd1591_4047  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
559 aa  339  9e-92  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.55 
 
 
584 aa  338  9.999999999999999e-92  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_007974  Rmet_5250  methyl-accepting chemotaxis protein, sensory transducer  43.71 
 
 
677 aa  338  9.999999999999999e-92  Cupriavidus metallidurans CH34  Bacteria  normal  0.0837898  normal  0.0130353 
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  43 
 
 
523 aa  337  1.9999999999999998e-91  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  43.32 
 
 
539 aa  338  1.9999999999999998e-91  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  43.32 
 
 
539 aa  338  1.9999999999999998e-91  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  45.07 
 
 
620 aa  338  1.9999999999999998e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_009078  BURPS1106A_A0285  methyl-accepting chemotaxis protein  60 
 
 
563 aa  337  2.9999999999999997e-91  Burkholderia pseudomallei 1106a  Bacteria  normal  0.877776  n/a   
 
 
-
 
NC_009075  BURPS668_A0379  methyl-accepting chemotaxis protein  60 
 
 
542 aa  337  2.9999999999999997e-91  Burkholderia pseudomallei 668  Bacteria  normal  0.366227  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1733  methyl-accepting chemotaxis protein I  59.69 
 
 
661 aa  337  3.9999999999999995e-91  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2191  methyl-accepting chemotaxis protein  60.37 
 
 
666 aa  337  3.9999999999999995e-91  Burkholderia thailandensis E264  Bacteria  normal  0.918882  n/a   
 
 
-
 
NC_008752  Aave_3444  methyl-accepting chemotaxis sensory transducer  60.55 
 
 
517 aa  337  3.9999999999999995e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  0.679068  normal  0.0634638 
 
 
-
 
NC_008784  BMASAVP1_0881  methyl-accepting chemotaxis protein  59.69 
 
 
661 aa  337  3.9999999999999995e-91  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  43.62 
 
 
618 aa  336  5e-91  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_012912  Dd1591_4048  methyl-accepting chemotaxis sensory transducer  43.39 
 
 
542 aa  336  5e-91  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  42.1 
 
 
566 aa  336  5.999999999999999e-91  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_008835  BMA10229_1169  methyl-accepting chemotaxis protein  59.69 
 
 
542 aa  336  7.999999999999999e-91  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA1872  methyl-accepting chemotaxis protein  59.69 
 
 
542 aa  336  7.999999999999999e-91  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A2146  methyl-accepting chemotaxis protein  59.69 
 
 
542 aa  336  7.999999999999999e-91  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  43.62 
 
 
539 aa  335  9e-91  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  60.24 
 
 
584 aa  335  1e-90  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  49.12 
 
 
589 aa  334  2e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_012880  Dd703_2474  methyl-accepting chemotaxis sensory transducer  40.75 
 
 
552 aa  334  2e-90  Dickeya dadantii Ech703  Bacteria  normal  0.356267  n/a   
 
 
-
 
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