Gene Dd1591_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_4048 
Symbol 
ID8119647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp4571332 
End bp4572960 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content57% 
IMG OID644854425 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003006325 
Protein GI251791604 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATAC TAAAAAATAT GAAGCTCGGC GCTATGCTCG GATCCGGTTT TATACTGGTG 
ATTCTGATCG GTTTTATCGT CGCGATTTTC GGGCGCAGCC AGCTGATTCA TGTGGGCAAT
AATCTGGATT ACCTGTCCAA TATTCGCCTG AATAACCTGA TTGCCATGCA GGATATTAGA
GACAATCTCA ATGCGGCGGC CCGCATTATT CGGGAAAGCG CGATACAAAC CGACGCGACC
CAGCTCGCTC AGGGAAAACA CGAACTCGAA CAGTTGATCG ACCGCAACAA TACGTTGCTC
CAGTTGCTGG ATGAAAAACT GAAGCTGAAA AAGTCACGTG AATTGCTGGC GCAGATCAAT
CAGGCGCGTC CGCCCTATTC CGCTGCGGTG CGAAAAGTCA TGGACTTGAG TCTCGCCGGC
CAGCAGGAAC AGGCTCGCAC GTTGATTCTG GGCGACCTGC TGACGACGCA AACGACGCTG
TTCAACGCGA TGGACACCCT GATCACCGAA CACAAGAATG ATACTGTTGC CATGTCCCAG
CGTTTCATGG ACGATGCCCG CGATGCCGGC ACCCTGCTAT TGATTGTCAC CGCCATCAGC
GCACTGCTGG CTGTGGTCGT CGCCTGGCTG ATTACACGCC GAATCAAAGG GCAACTGGGG
GGCGAGCCGG CTTATGCTTC GCATATCGCC CGGCAGGTGG CGCAAGGCGA CCTGTCTGTG
CATGTGATGC TGAAAACCGA TGACGATACC AGCCTGTTGG CCGCGATGCG CACCATGCGC
GACAGCCTCA GCCATATCGT CAATCAGGTG CGTCAGAGCA GCGAATCCAT CGCCACCGGT
TCGCAACAAA TCGCCATGGG CAACGCCGAT CTGAGCAGCC GTACCGAAGA ACAGGCCGCC
AGTCTGCAAC AAACCGCCGC GTCGATGGAG CAAATCAGCC AGACCATCCG CCAGAACGGT
GAAACGGTGC GTGAAGCCGC CCAGCTTGCC ACCCATGCCA GCGATACCGC CGCCAACGGC
CGCGAAGTCG TCGGTAACGT CATCCGCACC ATGGACGGCA TTACCGCCAG CTCGCGCAAA
ATCGGCGATA TTATCAGCGT TATCGACGGC ATCGCCTTCC AGACCAATAT TCTGGCGCTG
AATGCGGCGG TGGAAGCCGC CCGCGCCGGT GAACAGGGCC GCGGCTTCGC GGTAGTGGCC
GGAGAAGTCC GTTCGCTGGC GCAGCGCTCT GCTTCCGCCG CTCGTGAAAT CAAGGAACTG
ATCACCGAAA GTGTGGAAAA AGTGAAAAAC GGCGCGCAGT TGGTCGCCAA CGCCGGCACC
ACCATGGATG ATATCGTGAT GCAGGCACGC CGCGTCGCCG AGTTGATCAA GGAAATCGGC
GTCACGACAA CCGAGCAAGA ATCCGGTATT TCACAAATTA ACCAGGCGGT GAACCAGCTC
GATCAAGTCA CCCAGCAGAA CGCCGCGCTG GTGGAAGAAT CGGCCAGCGC CGCCGACAGC
CTGAGTGCTC AGGCCAGCCA TCTGGTGCAG TTGATGAATG TGTTCGTCGT GACTGAACAT
CATCAGCCAC ATGAGCAGGT CGCCTATCGC CCCCGTAGCG ATTTGCGGCT GGCGCTGACG
TCACGATAA
 
Protein sequence
MQILKNMKLG AMLGSGFILV ILIGFIVAIF GRSQLIHVGN NLDYLSNIRL NNLIAMQDIR 
DNLNAAARII RESAIQTDAT QLAQGKHELE QLIDRNNTLL QLLDEKLKLK KSRELLAQIN
QARPPYSAAV RKVMDLSLAG QQEQARTLIL GDLLTTQTTL FNAMDTLITE HKNDTVAMSQ
RFMDDARDAG TLLLIVTAIS ALLAVVVAWL ITRRIKGQLG GEPAYASHIA RQVAQGDLSV
HVMLKTDDDT SLLAAMRTMR DSLSHIVNQV RQSSESIATG SQQIAMGNAD LSSRTEEQAA
SLQQTAASME QISQTIRQNG ETVREAAQLA THASDTAANG REVVGNVIRT MDGITASSRK
IGDIISVIDG IAFQTNILAL NAAVEAARAG EQGRGFAVVA GEVRSLAQRS ASAAREIKEL
ITESVEKVKN GAQLVANAGT TMDDIVMQAR RVAELIKEIG VTTTEQESGI SQINQAVNQL
DQVTQQNAAL VEESASAADS LSAQASHLVQ LMNVFVVTEH HQPHEQVAYR PRSDLRLALT
SR