More than 300 homologs were found in PanDaTox collection
for query gene Nham_0354 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_0354  methyl-accepting chemotaxis sensory transducer  100 
 
 
360 aa  732    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4739  methyl-accepting chemotaxis sensory transducer  28.93 
 
 
450 aa  125  2e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  28.72 
 
 
449 aa  117  3e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_010511  M446_5211  methyl-accepting chemotaxis sensory transducer  27.78 
 
 
445 aa  113  4.0000000000000004e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.351267  normal  0.0732889 
 
 
-
 
NC_011894  Mnod_5958  methyl-accepting chemotaxis sensory transducer  27.73 
 
 
445 aa  108  1e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.28154  n/a   
 
 
-
 
NC_010511  M446_6117  methyl-accepting chemotaxis sensory transducer  25.24 
 
 
713 aa  101  2e-20  Methylobacterium sp. 4-46  Bacteria  normal  0.140639  normal 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  34.97 
 
 
904 aa  100  3e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_013216  Dtox_1954  methyl-accepting chemotaxis sensory transducer  48.72 
 
 
618 aa  99.8  8e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  36.31 
 
 
965 aa  98.6  2e-19  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_008347  Mmar10_2580  methyl-accepting chemotaxis sensory transducer  27.51 
 
 
447 aa  97.4  3e-19  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3465  methyl-accepting chemotaxis sensory transducer  38.16 
 
 
423 aa  97.1  4e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
538 aa  95.5  1e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  36 
 
 
533 aa  95.5  1e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_007643  Rru_A0632  chemotaxis sensory transducer  34.86 
 
 
736 aa  95.9  1e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.180969  n/a   
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  36.02 
 
 
658 aa  94.7  2e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  34.64 
 
 
545 aa  95.1  2e-18  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  36.02 
 
 
658 aa  93.6  5e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010510  Mrad2831_5878  methyl-accepting chemotaxis sensory transducer  37.06 
 
 
562 aa  93.6  5e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.338132 
 
 
-
 
NC_009674  Bcer98_3938  methyl-accepting chemotaxis sensory transducer  23.63 
 
 
432 aa  93.6  5e-18  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.0000498313  n/a   
 
 
-
 
NC_011004  Rpal_4791  methyl-accepting chemotaxis sensory transducer  36.08 
 
 
434 aa  93.6  5e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  32.85 
 
 
658 aa  92.8  8e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  38.32 
 
 
561 aa  92.8  8e-18  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  37.41 
 
 
662 aa  92.4  9e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.5 
 
 
650 aa  92  1e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_010511  M446_2544  methyl-accepting chemotaxis sensory transducer  34.52 
 
 
566 aa  91.7  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.476321  normal 
 
 
-
 
NC_007778  RPB_1030  methyl-accepting chemotaxis sensory transducer  35.62 
 
 
653 aa  91.3  2e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0363  methyl-accepting chemotaxis sensory transducer  37.74 
 
 
695 aa  91.3  2e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.566522 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  29.92 
 
 
540 aa  91.7  2e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  37.72 
 
 
674 aa  91.7  2e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  36.11 
 
 
537 aa  90.9  3e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  36.11 
 
 
546 aa  90.9  3e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  32.58 
 
 
528 aa  90.9  3e-17  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_008062  Bcen_6463  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
654 aa  90.9  3e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6698  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
605 aa  90.9  3e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0770827  normal  0.965565 
 
 
-
 
NC_010512  Bcenmc03_6304  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.64 
 
 
605 aa  90.9  3e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.598133  normal 
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  33.33 
 
 
518 aa  90.9  3e-17  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1313  methyl-accepting chemotaxis sensory transducer  36.78 
 
 
434 aa  90.5  4e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.204182 
 
 
-
 
NC_007778  RPB_1414  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
440 aa  90.5  4e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0801097  normal 
 
 
-
 
NC_011004  Rpal_4064  methyl-accepting chemotaxis sensory transducer  44.03 
 
 
651 aa  90.5  4e-17  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  35.29 
 
 
565 aa  90.5  4e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_008751  Dvul_1884  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
804 aa  90.5  4e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  0.571939  normal 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  34.97 
 
 
563 aa  90.1  5e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  34.52 
 
 
540 aa  90.1  5e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
545 aa  90.1  5e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  36.48 
 
 
608 aa  90.1  5e-17  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_013173  Dbac_0250  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
554 aa  90.1  5e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000234986  n/a   
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  33.71 
 
 
543 aa  90.1  6e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.69 
 
 
610 aa  89.7  6e-17  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  33.5 
 
 
538 aa  89.7  7e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_008782  Ajs_2065  methyl-accepting chemotaxis sensory transducer  35.33 
 
 
554 aa  89.7  7e-17  Acidovorax sp. JS42  Bacteria  normal  0.460232  normal  0.464376 
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  33.74 
 
 
538 aa  89.7  7e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_011992  Dtpsy_1888  methyl-accepting chemotaxis sensory transducer  35.33 
 
 
487 aa  89.4  8e-17  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  37.3 
 
 
564 aa  89.7  8e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.48 
 
 
558 aa  89.7  8e-17  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  33.73 
 
 
538 aa  89.4  8e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  34.25 
 
 
559 aa  89.4  9e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  33.84 
 
 
561 aa  89.4  9e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
672 aa  88.6  1e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  34.41 
 
 
561 aa  89  1e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2032  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
558 aa  88.6  1e-16  Methylobacterium populi BJ001  Bacteria  normal  normal  0.176129 
 
 
-
 
NC_007643  Rru_A0262  chemotaxis sensory transducer  26.29 
 
 
442 aa  89  1e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.244306  n/a   
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
523 aa  89  1e-16  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_009485  BBta_4246  putative methyl-accepting chemotaxis receptor/sensory transducer protein  33.52 
 
 
689 aa  89  1e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.456046  normal  0.433672 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
673 aa  89  1e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_010511  M446_4388  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
553 aa  88.6  1e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.789001  normal 
 
 
-
 
NC_010511  M446_3474  methyl-accepting chemotaxis sensory transducer  36.57 
 
 
697 aa  88.2  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.657022 
 
 
-
 
NC_013174  Jden_2472  methyl-accepting chemotaxis sensory transducer with GAF sensor  38.46 
 
 
519 aa  88.2  2e-16  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0704852  normal  0.0411737 
 
 
-
 
NC_007643  Rru_A1053  chemotaxis sensory transducer  39.23 
 
 
520 aa  88.6  2e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.664914  n/a   
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  39.23 
 
 
540 aa  87.8  2e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_007925  RPC_2846  methyl-accepting chemotaxis sensory transducer  35.33 
 
 
565 aa  88.2  2e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.430745  normal 
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  32.66 
 
 
535 aa  88.2  2e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_007958  RPD_1394  chemotaxis sensory transducer  34.15 
 
 
444 aa  87.8  2e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  30.51 
 
 
1150 aa  88.2  2e-16  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_011830  Dhaf_4393  methyl-accepting chemotaxis sensory transducer  26.8 
 
 
415 aa  88.2  2e-16  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  38.24 
 
 
545 aa  88.2  2e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  36.53 
 
 
568 aa  87.8  3e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_010501  PputW619_0210  methyl-accepting chemotaxis sensory transducer  32.52 
 
 
632 aa  87.8  3e-16  Pseudomonas putida W619  Bacteria  normal  0.248487  normal  0.150257 
 
 
-
 
NC_010511  M446_1024  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
562 aa  87.4  3e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2778  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
558 aa  87.8  3e-16  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.060825  normal 
 
 
-
 
NC_009943  Dole_1682  methyl-accepting chemotaxis sensory transducer  28.02 
 
 
749 aa  87.4  3e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0141753  n/a   
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
858 aa  87.8  3e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_009718  Fnod_0355  methyl-accepting chemotaxis sensory transducer  43.4 
 
 
280 aa  87  4e-16  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.271483  n/a   
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  50 
 
 
533 aa  87  4e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  34.59 
 
 
562 aa  87  4e-16  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_011004  Rpal_4682  methyl-accepting chemotaxis sensory transducer  37.88 
 
 
441 aa  87.4  4e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.22 
 
 
564 aa  87  4e-16  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
681 aa  87  4e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0918  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.04 
 
 
657 aa  86.7  5e-16  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  32.7 
 
 
686 aa  86.7  5e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2799  putative receptor/sensory transducer  33.54 
 
 
707 aa  86.7  5e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0655652  normal 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  35.98 
 
 
602 aa  87  5e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2242  methyl-accepting chemotaxis sensory transducer  36.41 
 
 
562 aa  86.7  5e-16  Methylobacterium populi BJ001  Bacteria  normal  0.0448901  normal  0.213644 
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  36.08 
 
 
561 aa  87  5e-16  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
566 aa  87  5e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3735  PAS  32 
 
 
521 aa  86.7  6e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  35.56 
 
 
428 aa  86.7  6e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_007643  Rru_A1712  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.35 
 
 
500 aa  86.7  6e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
730 aa  86.7  6e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  33.53 
 
 
667 aa  86.7  6e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  31.1 
 
 
536 aa  86.7  6e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
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