| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1888 |
|---|
| Symbol | |
|---|
| ID | 7382249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2010815 |
|---|
| End bp | 2012278 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643655205 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002553345 |
|---|
| Protein GI | 222111081 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGCC TGCGTTTCTC GGCCAAGCTG GCCCTGTTGG GAGGCGTGGC CGTGTTGGCA
CTGCTGGCCG TGGCGGGGGT GCAGGGGTGG GGGCCGCGCG CCACGTGGGC CGTGTGTGGC
GTGGCGGTGC TGGCCACCGC CTATCTGGCC ACGGCTTTCC AGGCCAGTGT GGCGGGCGAC
CTGCGGCGGC TGGGCGGCGT CATGGAGCGC ACGGCGCAGG GCGACCTGTG CAGCCGGGCC
GAAGTGCGCG GCCGCGATGA ACTGGCGCAC ATGGGCGAGC AACTCAACCG CATGGTGTAC
ACGCTCTCGT CGATGGTGGC CGACATTCGC AGCAACGCGG CGCTGGTGGC GCACGCGGGT
CAAAGCCTGG CGGCGGACAA CCGCGAACTG GCCGACCGCA CCGAGCAACA GGCCGCCAGC
CTGGAGCAAA CCGCGGCCAG CGTGGAGGAG CTGTCTTCCG CCGTGAACAA CAACGCGCAG
GCGGCTAGCG TGGCCGATCA GCGCGCCGGC GAGGTGCGCC AAGCCGCTGA GGCGGGCACC
CAGGCGATGG CGCGGGCGGT GGAGGCGGTG CAGGGCATCC AGAACGATGC CCGTCGCATG
GGCGAGATCA TCCAGGTGAT CGACGGCATC GCCTTCCAAA CCAACATCCT GGCGCTGAAT
GCCGCCGTGG AAGCGGCACG CGCGGGCGAG CAGGGCCGGG GTTTTGCCGT GGTGGCGGCC
GAGGTGCGCA CGCTGGCGGG CCGCTCGGCC GAGGCGGCGC GCGAGATCCG CGACCTCATT
GGCACGTCCG TGCGGCAGGT GGAGGGCAGC GCGGGGCTGA TCCGCACCGC CGGTGAGGGC
ATTGCGGCCA TGGCGCAAGG CATCCGTGGC GTGGCCGGGC ATGTGAGCGA AATCTCCCAC
TCGGTCAATG AACAGGGCAC GGGTCTGCGC GAGATCAGCA CCGCGGTGCA GCAACTGGAC
CAGATCACGC AGCGCAATGC CCAGATGGTG AGCGATGCCC TGCGCGAGGC ACAGGCGCTG
GAGAGCCGGG CGTCCACCCT GTCCCGGGCG GTGTTGGCGT TTCGCCTGCA GCAGGGTACG
GCCGAGGAGG CCGTGGCCCT GGTGCAGCGC GCTGCGGCCG TGCAGCGCGG CCTGCCGCGC
GACGCCTTTC TTCGCACGTT GACCGACCCC GCACAGCCCT ACCACGACCG CGACATGTAC
GTGTTCGCGC TCGATGCGGG CGGCACCTAC CTGGCCTTTG GCGGCAATCC CGCCAAAGTG
GGAACGCGGG TGCAGGACAT TCCCGGTATT GCCGGGGATG CGCTGGTCAG CGCCATCGTG
GCCCAGGCCG AACGCGCGCC GGGCTGGGTG GAATACGACA TCACCAATCC GGCCACGGGC
GCGGTGCAAA CCAAGATGTC CTACGTGCAG CGCGCGGGAG ATGTCTATCT GGGCTGTGGC
GTCTACAAGT CGCTCGCGGC CTGA
|
|---|
| Protein sequence | MRRLRFSAKL ALLGGVAVLA LLAVAGVQGW GPRATWAVCG VAVLATAYLA TAFQASVAGD
LRRLGGVMER TAQGDLCSRA EVRGRDELAH MGEQLNRMVY TLSSMVADIR SNAALVAHAG
QSLAADNREL ADRTEQQAAS LEQTAASVEE LSSAVNNNAQ AASVADQRAG EVRQAAEAGT
QAMARAVEAV QGIQNDARRM GEIIQVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAA
EVRTLAGRSA EAAREIRDLI GTSVRQVEGS AGLIRTAGEG IAAMAQGIRG VAGHVSEISH
SVNEQGTGLR EISTAVQQLD QITQRNAQMV SDALREAQAL ESRASTLSRA VLAFRLQQGT
AEEAVALVQR AAAVQRGLPR DAFLRTLTDP AQPYHDRDMY VFALDAGGTY LAFGGNPAKV
GTRVQDIPGI AGDALVSAIV AQAERAPGWV EYDITNPATG AVQTKMSYVQ RAGDVYLGCG
VYKSLAA
|
|---|
| |