Gene Dole_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1682 
Symbol 
ID5694519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2010986 
End bp2013235 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content53% 
IMG OID641264277 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001529563 
Protein GI158521693 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0141753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCA TCAAACAACA CCGTCACGTG CCCGCACTCC TTCTGTGTAC GCTGCTTGTT 
TTCTGCGGCC TTCTGGCTAC CGCCGTTGCG GCCCCTTCCG GCGTGCCCCT TGATGATTCC
ACCGGCACGC TCTACATCGG GCAGCAGGTG GAATACATGG AAGACAGGGC CGGTGCCCTG
TTTATCACCG ATGTGACCGA CATGGAAGAT CGATGGAAAG CGTCGGACAG CACTGCCTTA
AGCTTCGGGT TTACATCCTC GACCTACTGG TTCCGGTTTA CCCTGGACAA CACCACCGAC
CGTCCTAGGG ATTTTTACCT TGAGTTCGCG TACCCCCTTC TTGACTTTAT CGAGCTTTAC
ACACCCCAAA CCGAAGGCCT GTTCAATACC ATCAAAGCCG GGGACCATTA CCCCTTTTCC
ACACGGGAAA TCATTGACAA AGACTTTGTT TTTCTGCTGA CCCAGGCTCC CGGCCCCGCC
ACTTATTATG TGAAAGTTAA AACCAGTTCT TCCCTTAATT TTGAACCGGT GGTCCGTTCT
CACAATTCCT ACCTGAGCAA GATCAACAGG ACCTACCCCA TCTTCTGGCT CTATTACGGC
GCCATGCTGA TCATGGTGAT CTATAACCTG GTCCTCGTTT TCGTGATCCG GGAAAGAAGT
TATCTCTTCC TGGTCCTTCT CATTCTCTCT TATTCCCTGT TTCAATTCAC GCTCAACGGA
TTTTCCTTTC AGTACCTGTG GCCGAACTCC ATCTGGTGGG CCAACAACTG CCTGCCCATG
TTCATGGGTC TTGCCATGGC CATTGCCATG CTGTTTATGC GGTCTTTTAT CGGCATTCGG
GAGCGCCATG CCAAAAGCCT GGTGGACCGG GTCTCCATCT ACCTGGTGAT TATTCCCAAC
ACCGCATGGG CCGTTGGTTC TCTTCTGCTT CCCTATGCCG TGAGCATCAG AGTGGCTACG
GCGCTTATCA TCTTCTCTCT GGTTGTGGTC ATTCCCAGCG GGTTTATCTC CCTTTCATTT
ACACGATCAA TTCGATTTAT TGTGATCAGC TGCGCCTGCC TGTTTATCGG GATCCTGCTG
TTCGCGTTAA AAACATTCGG GCTCCTGCCT TCCAACTTTA TCACCCAGTG GGGTGTTCAG
ATCGGTTCCG CGGTTTTCAT CGCGCTTCTT TCCATCGGTC TTGCCGACAA GATCACGGCC
ATGAAAGACG AACTGATCAC CACCAACTCC AACATCTCCC TGATGCTCCA GAGCATTTCC
CAGGAGGTGG AGGTCCAGGA AAATGACCTT GAAAAATACA AAGAAGAAGA GATCGGCGAC
ATTCTCAACG AAAGGTTTCA CACCTTCATG GACCGGTTTA AGGACCTGGT GGATGATGTC
AACAGTAACA CCAATCTGCT GAAGAGTTCG TCGGCCAACC TGCTGGCCCT GTCCGATAAA
ATGACATCGG AAACCGCTGA AATTTCAGCC AACTCCAACT CCGTTGCCTC AGCCTCGGAA
GAGATGAGTT CCAAGATGGT GGCCATTGCC AGCACCATGG AGCAGACCTC CCAGAACGTC
AACCTGATCG TCTCCTCGGT GGAGGAGATG ACCACCACCT CCGACGAGAT CAGCATGAGC
ACCGAATCGG CCCGGCAGAC AACGGAAAAC GCCGTTGCCC AGGCCAAAAA CGTGTCCCAG
AAGGTGGACA ACCTGGGCAT CGCCGCCGAA AGAATCGGCA CCGTCACCGA GGTGATTGCC
GAGATATCCA AAAAGACCAA CCTGCTGGCC TTAAATGCCA CTATCGAGGC GGCCCGGGCC
GGAGAAGCGG GCAAGGGGTT CGCCGTTGTG GCCAATGAAA TAAAGGATCT GGCACGGCAG
ACTGCCGACG CCACCCAGCA GATTAACCGG CAGATCGAAG AGAACAAGCA GGTAACCGTG
GCGGCGGTAA AAGAGATCGG CCAGATTGTG GAGACCATCA AAAACGTCAA CGAGATCGTC
TCCACCATTG CGTCGGCCAT CGAAGAACAG TCGATTTCCA TCCGGGAAAT TGCCAGCAAC
GTGGCCCAGA TATCCCAGGG CATCTCCGGG GTCAACAAGG GCGTGTCTCA GTGCTCTATC
GTCGCCAACA ACGTGTCAAA GGAGGTGGTC TCCCTGAGTG CCTCCTCGAA GCAGATGAAC
AGCAACAGCC TGACTGTTCG GGAGAGTGCC GATGACCTGC TGAAGATGGC CCAGCATCTC
ACGGAGCTGA TGCAGAAATT TAAAGTTTAA
 
Protein sequence
MTSIKQHRHV PALLLCTLLV FCGLLATAVA APSGVPLDDS TGTLYIGQQV EYMEDRAGAL 
FITDVTDMED RWKASDSTAL SFGFTSSTYW FRFTLDNTTD RPRDFYLEFA YPLLDFIELY
TPQTEGLFNT IKAGDHYPFS TREIIDKDFV FLLTQAPGPA TYYVKVKTSS SLNFEPVVRS
HNSYLSKINR TYPIFWLYYG AMLIMVIYNL VLVFVIRERS YLFLVLLILS YSLFQFTLNG
FSFQYLWPNS IWWANNCLPM FMGLAMAIAM LFMRSFIGIR ERHAKSLVDR VSIYLVIIPN
TAWAVGSLLL PYAVSIRVAT ALIIFSLVVV IPSGFISLSF TRSIRFIVIS CACLFIGILL
FALKTFGLLP SNFITQWGVQ IGSAVFIALL SIGLADKITA MKDELITTNS NISLMLQSIS
QEVEVQENDL EKYKEEEIGD ILNERFHTFM DRFKDLVDDV NSNTNLLKSS SANLLALSDK
MTSETAEISA NSNSVASASE EMSSKMVAIA STMEQTSQNV NLIVSSVEEM TTTSDEISMS
TESARQTTEN AVAQAKNVSQ KVDNLGIAAE RIGTVTEVIA EISKKTNLLA LNATIEAARA
GEAGKGFAVV ANEIKDLARQ TADATQQINR QIEENKQVTV AAVKEIGQIV ETIKNVNEIV
STIASAIEEQ SISIREIASN VAQISQGISG VNKGVSQCSI VANNVSKEVV SLSASSKQMN
SNSLTVRESA DDLLKMAQHL TELMQKFKV