More than 300 homologs were found in PanDaTox collection
for query gene Mvan_4252 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008726  Mvan_4252  short-chain dehydrogenase/reductase SDR  100 
 
 
246 aa  488  1e-137  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2396  short-chain dehydrogenase/reductase SDR  90.65 
 
 
246 aa  402  1e-111  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3798  short-chain dehydrogenase/reductase SDR  86.36 
 
 
246 aa  397  9.999999999999999e-111  Mycobacterium sp. MCS  Bacteria  normal  0.317605  n/a   
 
 
-
 
NC_008705  Mkms_3871  short-chain dehydrogenase/reductase SDR  86.36 
 
 
246 aa  397  9.999999999999999e-111  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3802  short-chain dehydrogenase/reductase SDR  85.54 
 
 
246 aa  396  1e-109  Mycobacterium sp. JLS  Bacteria  normal  0.805429  normal  0.439717 
 
 
-
 
NC_013440  Hoch_5258  short-chain dehydrogenase/reductase SDR  40.08 
 
 
272 aa  153  2e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16540  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  39.92 
 
 
280 aa  151  1e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3904  short-chain dehydrogenase/reductase SDR  41.22 
 
 
284 aa  146  2.0000000000000003e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.367443  normal 
 
 
-
 
NC_007778  RPB_0022  short chain dehydrogenase  38.25 
 
 
293 aa  146  3e-34  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0025  short chain dehydrogenase  37.85 
 
 
291 aa  146  3e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0723  short chain dehydrogenase  37.45 
 
 
293 aa  145  8.000000000000001e-34  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.476462 
 
 
-
 
NC_011071  Smal_3295  short chain dehydrogenase  38.62 
 
 
272 aa  144  1e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3612  short-chain dehydrogenase/reductase SDR  40.98 
 
 
289 aa  143  3e-33  Methylobacterium extorquens PA1  Bacteria  normal  0.225271  normal 
 
 
-
 
NC_010725  Mpop_4291  short-chain dehydrogenase/reductase SDR  39.84 
 
 
289 aa  141  9.999999999999999e-33  Methylobacterium populi BJ001  Bacteria  normal  0.307947  normal  0.943502 
 
 
-
 
NC_007925  RPC_0020  short chain dehydrogenase  38.11 
 
 
298 aa  140  1.9999999999999998e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3816  short chain dehydrogenase  40.66 
 
 
273 aa  138  7e-32  Anaeromyxobacter sp. K  Bacteria  normal  0.651668  n/a   
 
 
-
 
NC_013501  Rmar_2203  short-chain dehydrogenase/reductase SDR  38.11 
 
 
279 aa  138  7.999999999999999e-32  Rhodothermus marinus DSM 4252  Bacteria  normal  0.424869  n/a   
 
 
-
 
NC_011891  A2cp1_3900  short chain dehydrogenase  40.66 
 
 
273 aa  138  7.999999999999999e-32  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_13251  short chain dehydrogenase  36.51 
 
 
282 aa  138  1e-31  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.922859 
 
 
-
 
NC_008740  Maqu_2808  short chain dehydrogenase  36.97 
 
 
274 aa  137  1e-31  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1399  short chain dehydrogenase  40.3 
 
 
284 aa  136  3.0000000000000003e-31  Mycobacterium sp. JLS  Bacteria  normal  0.319631  normal 
 
 
-
 
NC_008146  Mmcs_1365  short chain dehydrogenase  40.3 
 
 
284 aa  136  3.0000000000000003e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1383  short chain dehydrogenase  40.3 
 
 
284 aa  136  3.0000000000000003e-31  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2109  short-chain dehydrogenase/reductase SDR  36.95 
 
 
275 aa  135  5e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.144161 
 
 
-
 
NC_010511  M446_2373  short-chain dehydrogenase/reductase SDR  37.55 
 
 
284 aa  134  9.999999999999999e-31  Methylobacterium sp. 4-46  Bacteria  normal  0.282253  normal 
 
 
-
 
NC_011894  Mnod_2838  short-chain dehydrogenase/reductase SDR  37.45 
 
 
284 aa  134  9.999999999999999e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.67123  n/a   
 
 
-
 
NC_007760  Adeh_3760  short chain dehydrogenase  39.83 
 
 
273 aa  134  1.9999999999999998e-30  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.601387  n/a   
 
 
-
 
NC_009077  Mjls_3813  short chain dehydrogenase  38.91 
 
 
285 aa  133  3e-30  Mycobacterium sp. JLS  Bacteria  normal  normal  0.186158 
 
 
-
 
NC_008146  Mmcs_3827  short chain dehydrogenase  38.91 
 
 
285 aa  133  3e-30  Mycobacterium sp. MCS  Bacteria  normal  0.393449  n/a   
 
 
-
 
NC_008825  Mpe_A0413  short chain dehydrogenase  39.37 
 
 
278 aa  133  3e-30  Methylibium petroleiphilum PM1  Bacteria  normal  0.0685563  normal 
 
 
-
 
NC_008705  Mkms_3901  short chain dehydrogenase  38.91 
 
 
285 aa  133  3e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4069  short chain dehydrogenase  43.3 
 
 
239 aa  132  3.9999999999999996e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0596677  n/a   
 
 
-
 
NC_007492  Pfl01_5211  short chain dehydrogenase  35.95 
 
 
274 aa  132  6.999999999999999e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00876226 
 
 
-
 
NC_013739  Cwoe_2554  short-chain dehydrogenase/reductase SDR  38.68 
 
 
284 aa  131  1.0000000000000001e-29  Conexibacter woesei DSM 14684  Bacteria  normal  0.44197  normal  0.213043 
 
 
-
 
NC_010320  Teth514_1783  3-ketoacyl-(acyl-carrier-protein) reductase  33.74 
 
 
255 aa  131  1.0000000000000001e-29  Thermoanaerobacter sp. X514  Bacteria  decreased coverage  0.000332127  n/a   
 
 
-
 
NC_008148  Rxyl_2798  short-chain dehydrogenase/reductase SDR  39.84 
 
 
235 aa  129  4.0000000000000003e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_26650  short chain dehydrogenase  36.55 
 
 
274 aa  129  4.0000000000000003e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.999044  normal 
 
 
-
 
NC_011831  Cagg_1587  short-chain dehydrogenase/reductase SDR  44.21 
 
 
256 aa  129  5.0000000000000004e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_1776  short chain dehydrogenase  38.61 
 
 
281 aa  129  5.0000000000000004e-29  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.306101  normal  0.665044 
 
 
-
 
NC_008148  Rxyl_3046  short-chain dehydrogenase/reductase SDR  36.63 
 
 
252 aa  128  7.000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_1326  short chain dehydrogenase  36.28 
 
 
295 aa  128  9.000000000000001e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000371918 
 
 
-
 
NC_009675  Anae109_3873  short chain dehydrogenase  37.92 
 
 
273 aa  127  1.0000000000000001e-28  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11957  short chain dehydrogenase  35.86 
 
 
255 aa  128  1.0000000000000001e-28  Mycobacterium tuberculosis F11  Bacteria  normal  0.0556392  normal  0.717734 
 
 
-
 
NC_010338  Caul_0159  short-chain dehydrogenase/reductase SDR  40 
 
 
249 aa  127  2.0000000000000002e-28  Caulobacter sp. K31  Bacteria  normal  0.410897  normal  0.168063 
 
 
-
 
NC_009656  PSPA7_2262  short chain dehydrogenase  35.74 
 
 
274 aa  126  4.0000000000000003e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  0.909306  n/a   
 
 
-
 
NC_007643  Rru_A1306  short chain dehydrogenase  38.24 
 
 
277 aa  125  5e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.174791  n/a   
 
 
-
 
NC_008726  Mvan_4262  short chain dehydrogenase  34.75 
 
 
289 aa  125  6e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.696965 
 
 
-
 
NC_011737  PCC7424_5536  short-chain dehydrogenase/reductase SDR  35.2 
 
 
254 aa  125  8.000000000000001e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0819159 
 
 
-
 
NC_006368  lpp1337  short chain dehydrogenase  34.43 
 
 
269 aa  124  1e-27  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1333  short chain dehydrogenase  34.02 
 
 
269 aa  124  1e-27  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_6842  short-chain dehydrogenase/reductase SDR  37.7 
 
 
271 aa  123  2e-27  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2386  short chain dehydrogenase  34.85 
 
 
286 aa  123  2e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2450  3-oxoacyl-(acyl-carrier-protein) reductase  35.48 
 
 
249 aa  124  2e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4824  short-chain dehydrogenase/reductase SDR  38.52 
 
 
254 aa  123  3e-27  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3747  short-chain dehydrogenase/reductase SDR  38.52 
 
 
254 aa  123  3e-27  Ralstonia pickettii 12D  Bacteria  normal  0.191543  normal 
 
 
-
 
NC_007974  Rmet_5502  short chain dehydrogenase  34.41 
 
 
271 aa  123  3e-27  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0026  short-chain dehydrogenase/reductase SDR  35.95 
 
 
249 aa  123  3e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.94443  normal 
 
 
-
 
NC_013169  Ksed_25480  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  38.93 
 
 
274 aa  123  3e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2206  short-chain dehydrogenase/reductase SDR  40.08 
 
 
266 aa  123  3e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  0.416605  n/a   
 
 
-
 
NC_007348  Reut_B3486  short chain dehydrogenase  37.45 
 
 
247 aa  122  5e-27  Ralstonia eutropha JMP134  Bacteria  normal  0.425497  n/a   
 
 
-
 
NC_010571  Oter_3812  short-chain dehydrogenase/reductase SDR  37.04 
 
 
255 aa  122  5e-27  Opitutus terrae PB90-1  Bacteria  normal  0.466174  normal  0.349855 
 
 
-
 
NC_013526  Tter_2517  short-chain dehydrogenase/reductase SDR  34.52 
 
 
257 aa  122  6e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.401645  n/a   
 
 
-
 
NC_009427  Saro_3600  short-chain dehydrogenase/reductase SDR  35.38 
 
 
287 aa  121  8e-27  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.181549  n/a   
 
 
-
 
NC_009077  Mjls_4014  short chain dehydrogenase  38.02 
 
 
284 aa  121  9.999999999999999e-27  Mycobacterium sp. JLS  Bacteria  normal  0.0877933  normal 
 
 
-
 
NC_010623  Bphy_5382  short chain dehydrogenase  37.92 
 
 
247 aa  121  9.999999999999999e-27  Burkholderia phymatum STM815  Bacteria  normal  0.429427  normal  0.712878 
 
 
-
 
NC_008392  Bamb_6225  short-chain dehydrogenase/reductase SDR  37.7 
 
 
252 aa  121  9.999999999999999e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2695  short chain dehydrogenase  35.66 
 
 
274 aa  120  1.9999999999999998e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.18208  normal  0.175359 
 
 
-
 
NC_007355  Mbar_A2512  3-oxoacyl-(acyl-carrier protein) reductase  33.6 
 
 
236 aa  120  1.9999999999999998e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0588198  normal  0.237046 
 
 
-
 
NC_008148  Rxyl_0541  short-chain dehydrogenase/reductase SDR  35.51 
 
 
251 aa  120  1.9999999999999998e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4691  short chain dehydrogenase  35.74 
 
 
281 aa  120  3e-26  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0951384  normal  0.0455737 
 
 
-
 
NC_010338  Caul_0688  short chain dehydrogenase  34.78 
 
 
285 aa  119  3.9999999999999996e-26  Caulobacter sp. K31  Bacteria  normal  normal  0.902774 
 
 
-
 
NC_013159  Svir_33490  short-chain alcohol dehydrogenase  38.22 
 
 
247 aa  119  3.9999999999999996e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.343117  normal  0.392445 
 
 
-
 
NC_014148  Plim_3123  3-oxoacyl-(acyl-carrier-protein) reductase  32.23 
 
 
251 aa  118  7.999999999999999e-26  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0932491  n/a   
 
 
-
 
NC_009436  Ent638_1133  short-chain dehydrogenase/reductase SDR  35.95 
 
 
247 aa  117  9.999999999999999e-26  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_1282  short chain dehydrogenase  37.28 
 
 
296 aa  118  9.999999999999999e-26  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2398  short-chain dehydrogenase/reductase SDR  34.8 
 
 
259 aa  117  1.9999999999999998e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.732421  n/a   
 
 
-
 
NC_010508  Bcenmc03_1396  short-chain dehydrogenase/reductase SDR  36.21 
 
 
248 aa  117  1.9999999999999998e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.872133 
 
 
-
 
NC_013037  Dfer_0299  short-chain dehydrogenase/reductase SDR  38.83 
 
 
261 aa  117  1.9999999999999998e-25  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.385793 
 
 
-
 
NC_009077  Mjls_4153  short-chain dehydrogenase/reductase SDR  36.65 
 
 
287 aa  116  3e-25  Mycobacterium sp. JLS  Bacteria  normal  0.0668382  normal  0.810998 
 
 
-
 
NC_007948  Bpro_3931  short chain dehydrogenase  34.9 
 
 
275 aa  116  3e-25  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.199472 
 
 
-
 
NC_008726  Mvan_2884  short-chain dehydrogenase/reductase SDR  35.94 
 
 
295 aa  116  3e-25  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.114191  normal 
 
 
-
 
NC_009253  Dred_3003  short-chain dehydrogenase/reductase SDR  36.98 
 
 
257 aa  116  3e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  0.605713  n/a   
 
 
-
 
NC_010172  Mext_0292  short-chain dehydrogenase/reductase SDR  36.33 
 
 
262 aa  116  3.9999999999999997e-25  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.469065 
 
 
-
 
NC_013947  Snas_2729  short-chain dehydrogenase/reductase SDR  33.6 
 
 
250 aa  116  3.9999999999999997e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.189012  normal  0.165554 
 
 
-
 
NC_007413  Ava_3459  Short-chain dehydrogenase/reductase SDR  34.98 
 
 
249 aa  116  3.9999999999999997e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3874  short chain dehydrogenase  39 
 
 
256 aa  116  3.9999999999999997e-25  Cupriavidus metallidurans CH34  Bacteria  normal  0.122974  normal  0.933314 
 
 
-
 
NC_012560  Avin_31000  Short-chain dehydrogenase/reductase SDR  37.14 
 
 
255 aa  116  3.9999999999999997e-25  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_0738  short-chain dehydrogenase/reductase SDR  34.73 
 
 
280 aa  115  5e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008942  Mlab_0825  hypothetical protein  39.06 
 
 
258 aa  115  6.9999999999999995e-25  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_009077  Mjls_3399  short-chain dehydrogenase/reductase SDR  36.4 
 
 
251 aa  114  1.0000000000000001e-24  Mycobacterium sp. JLS  Bacteria  normal  0.265476  normal  0.579067 
 
 
-
 
NC_009511  Swit_3078  short-chain dehydrogenase/reductase SDR  41.49 
 
 
255 aa  114  1.0000000000000001e-24  Sphingomonas wittichii RW1  Bacteria  normal  0.485877  normal 
 
 
-
 
NC_009051  Memar_0925  3-ketoacyl-(acyl-carrier-protein) reductase  36.59 
 
 
251 aa  114  1.0000000000000001e-24  Methanoculleus marisnigri JR1  Archaea  normal  0.568448  n/a   
 
 
-
 
NC_009720  Xaut_1138  short-chain dehydrogenase/reductase SDR  37.9 
 
 
255 aa  114  1.0000000000000001e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0368  short-chain dehydrogenase/reductase SDR  35.92 
 
 
248 aa  114  1.0000000000000001e-24  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0719  short-chain dehydrogenase/reductase SDR  37.86 
 
 
248 aa  114  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0936  short-chain dehydrogenase/reductase SDR  35.39 
 
 
248 aa  114  1.0000000000000001e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.340631  n/a   
 
 
-
 
NC_008146  Mmcs_3389  short-chain dehydrogenase/reductase SDR  36.4 
 
 
251 aa  114  1.0000000000000001e-24  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1418  short-chain dehydrogenase/reductase SDR  35.39 
 
 
248 aa  114  1.0000000000000001e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  0.470556  n/a   
 
 
-
 
NC_008705  Mkms_3451  short-chain dehydrogenase/reductase SDR  36.4 
 
 
251 aa  114  1.0000000000000001e-24  Mycobacterium sp. KMS  Bacteria  normal  0.282866  normal  0.301564 
 
 
-
 
NC_010335  Caul_5136  short-chain dehydrogenase/reductase SDR  32.65 
 
 
254 aa  114  2.0000000000000002e-24  Caulobacter sp. K31  Bacteria  normal  0.708802  normal 
 
 
-
 
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