Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5211 |
Symbol | |
ID | 3716456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5860375 |
End bp | 5861199 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | short chain dehydrogenase |
Protein accession | YP_350939 |
Protein GI | 77461432 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00876226 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGCTAA AAGGCAAAAC CTTGTTCATC ACTGGCGCCA GCCGTGGCAT CGGGCGCGAG ATTGCGCTGC GGGCTGCACA GGACGGGGCC AATATCGTGA TCGCGGCCAA GAGCGCCGAG CCGCACGCCA AGTTGCCCGG CACCATCCAC AGCGTCGCCG TTGAAGTCGA AGCGGCCGGC GGCAAGGCCC TGGCGCTGCA ACTGGATGTG CGGGATGAGG AGGCGGTGCG ACAGGCGCTG GCCCAGGCCA ATCAACATTT TGGCGGGATC GATGCGCTGG TGAACAACGC CGGGGCGATC AAGTTGACCG GTGTGCAGCA CATCGAACTC AAGCGTTTCG ACCTGATGCA CCAGATCAAC ACCCGCGCGG TGTTGCTGTG CAGCCAGGCG GCCTTGCCCT ACCTGAAGAA ATCCTCCGGG CACATCCTTA ACCTGTCACC GCCGCTGAAT CTGGCCAGTA AGTGGTTCGC CCAGTACAGC CCCTACACCG TGACCAAGTA CGGCATGAGC ATGCTGACGG TCGGGATGAG CGAGGAGTTT GCCAACTACG GCATCAGCGT CAATTCGCTG TGGCCGCAGA CCATGATTGC CACGGCAGCC ATCGAGTTTC AGCTGGGCAA TCGGGAGTCG TTCAAGCATG CGCGCACACC AGCGATCATG GCGGATGCGG CGCATGTGAT TCTGAGCAGC AGCGGGCGGC GGATTACCGG GCGGTTGTTG ATTGATGAAG AGATCTTGCG CGAAAGCGGC GTGAGCGAAT TCGACCACTA TCGGTTTGAG CCGAAGAGTG ACGCGAAGTT GATGACGGAT CTGTTTATCG ACTGA
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Protein sequence | MSLKGKTLFI TGASRGIGRE IALRAAQDGA NIVIAAKSAE PHAKLPGTIH SVAVEVEAAG GKALALQLDV RDEEAVRQAL AQANQHFGGI DALVNNAGAI KLTGVQHIEL KRFDLMHQIN TRAVLLCSQA ALPYLKKSSG HILNLSPPLN LASKWFAQYS PYTVTKYGMS MLTVGMSEEF ANYGISVNSL WPQTMIATAA IEFQLGNRES FKHARTPAIM ADAAHVILSS SGRRITGRLL IDEEILRESG VSEFDHYRFE PKSDAKLMTD LFID
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