Gene Pfl01_5211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5211 
Symbol 
ID3716456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5860375 
End bp5861199 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID 
Productshort chain dehydrogenase 
Protein accessionYP_350939 
Protein GI77461432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00876226 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCTAA AAGGCAAAAC CTTGTTCATC ACTGGCGCCA GCCGTGGCAT CGGGCGCGAG 
ATTGCGCTGC GGGCTGCACA GGACGGGGCC AATATCGTGA TCGCGGCCAA GAGCGCCGAG
CCGCACGCCA AGTTGCCCGG CACCATCCAC AGCGTCGCCG TTGAAGTCGA AGCGGCCGGC
GGCAAGGCCC TGGCGCTGCA ACTGGATGTG CGGGATGAGG AGGCGGTGCG ACAGGCGCTG
GCCCAGGCCA ATCAACATTT TGGCGGGATC GATGCGCTGG TGAACAACGC CGGGGCGATC
AAGTTGACCG GTGTGCAGCA CATCGAACTC AAGCGTTTCG ACCTGATGCA CCAGATCAAC
ACCCGCGCGG TGTTGCTGTG CAGCCAGGCG GCCTTGCCCT ACCTGAAGAA ATCCTCCGGG
CACATCCTTA ACCTGTCACC GCCGCTGAAT CTGGCCAGTA AGTGGTTCGC CCAGTACAGC
CCCTACACCG TGACCAAGTA CGGCATGAGC ATGCTGACGG TCGGGATGAG CGAGGAGTTT
GCCAACTACG GCATCAGCGT CAATTCGCTG TGGCCGCAGA CCATGATTGC CACGGCAGCC
ATCGAGTTTC AGCTGGGCAA TCGGGAGTCG TTCAAGCATG CGCGCACACC AGCGATCATG
GCGGATGCGG CGCATGTGAT TCTGAGCAGC AGCGGGCGGC GGATTACCGG GCGGTTGTTG
ATTGATGAAG AGATCTTGCG CGAAAGCGGC GTGAGCGAAT TCGACCACTA TCGGTTTGAG
CCGAAGAGTG ACGCGAAGTT GATGACGGAT CTGTTTATCG ACTGA
 
Protein sequence
MSLKGKTLFI TGASRGIGRE IALRAAQDGA NIVIAAKSAE PHAKLPGTIH SVAVEVEAAG 
GKALALQLDV RDEEAVRQAL AQANQHFGGI DALVNNAGAI KLTGVQHIEL KRFDLMHQIN
TRAVLLCSQA ALPYLKKSSG HILNLSPPLN LASKWFAQYS PYTVTKYGMS MLTVGMSEEF
ANYGISVNSL WPQTMIATAA IEFQLGNRES FKHARTPAIM ADAAHVILSS SGRRITGRLL
IDEEILRESG VSEFDHYRFE PKSDAKLMTD LFID