Gene Anae109_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3873 
Symbol 
ID5376562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4519128 
End bp4519949 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content70% 
IMG OID640845398 
Productshort chain dehydrogenase 
Protein accessionYP_001381036 
Protein GI153006711 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAC TTCGAGGAAA GACGCTCTTC ATCACCGGCG CGAGCCGCGG CATCGGCAAG 
GCGATCGGCA TCGCCGCCGC CCGCGAGGGC GCGAACGTGG TGGTCGCGGC GAAGTCGAGC
GCGCCGAACC CGAAGCTGCC GGGGACGATC CACGACGCCG CCCAGGAGAT CGAGGCCGCC
GGAGGAAAGG CGCTCGCGGT CCACTGCGAC ATCCGCGACG AGGCGGAGAT CGCGGCGGCG
GTGAAGGCGG CGGCGGAGCG GTTCGGGGGG ATCGACGTGC TCGTCAACAA CGCGAGCGCG
ATCTTCCTCG CGGGCACCGT GGCCACGCCG ATGAAGCGCT ACGACCTCAT GCACCAGGTG
AACGCGCGGG GCACCTTCGC CTGCTCGCAG GCGTGCATCC CGCTCCTGGA GAAGAGCGCG
AACCCCCACA TCCTGAACCT GTCGCCGCCG CTCTCCCTGA ACCCGCGCTG GTTCGCCCCG
CACGTCGCGT ACACCATGGC GAAGTACGGC ATGAGCCTGT GCGTGCTCGG GATGGCGGAG
GAGCTGCGCG AGCAGGGCAT CGCGGTGAAC GCCCTCTGGC CGCGCACCGT GATCGCGACC
GCGGCCCTGA ACCTCCTCGG CGGCGAGGAG ACGGCGAGGC ACGGCCGGAC TCCGGAGATC
GTCGCGGACG CGGCGGTGGC GATCCTGAAG CGCGAGAGCC GGAGCTGCAC CGGCAACTTC
TTCATCGACG AGGACGTGCT TCGGGAGGAG GGCGTCGCGG GCTTCGCGAG GTACGCGGTG
GAGCCGGGGC AGGAGCTGAT GCCGGACCTG TTCCTCGACT GA
 
Protein sequence
MPSLRGKTLF ITGASRGIGK AIGIAAAREG ANVVVAAKSS APNPKLPGTI HDAAQEIEAA 
GGKALAVHCD IRDEAEIAAA VKAAAERFGG IDVLVNNASA IFLAGTVATP MKRYDLMHQV
NARGTFACSQ ACIPLLEKSA NPHILNLSPP LSLNPRWFAP HVAYTMAKYG MSLCVLGMAE
ELREQGIAVN ALWPRTVIAT AALNLLGGEE TARHGRTPEI VADAAVAILK RESRSCTGNF
FIDEDVLREE GVAGFARYAV EPGQELMPDL FLD