Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1587 |
Symbol | |
ID | 7268153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1938759 |
End bp | 1939529 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643566429 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002462925 |
Protein GI | 219848492 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGTTTC AAGGCAAAGT CGCAATTGTC ACCGGCGGCG CACAAGGCAT TGGGCGGGCT ACCGCACTAG CATTGGCGCG CGAAGGGGCT GCGGTTGTCA TCGCTGACCG CGATGCTGCG GCGACAACGG CGTTGGTCGA GGGGATCAAT GCATGGGGAG GCCGCGCACT CGCCGTTATC GCCGATGTCA GCGATGAGAG CGATGCAGCT CGCATTGCCA ACGATACAGT CTTGGAATTC GGTGGGATCG ATCTGTTGGT CAATAATGCC GGTATTCAAC AGCCGGGTAC CATTGAAAGT ACGACTTTAC AACTTTGGCA AGAGATCATT AATGTCAACC TGACCGGCGT CTTTTTAGTT TCACGCTTTG TGATGCCTGA GTTGCGACGG CGCGGTGGAG GAGCCATTGT CAACGTGGCT TCGGTCTATG GGTTGCGGGC CGAAGCAGGG TGGGCAGCGT ATGCCGCCTC AAAAGGCGGG GTGATCGCCT TAACCCGGGC AATGGCGCTC GATGGCGCTC CTGACGGTAT TCGCGTGAAT TGTGTTTGTC CCGGCTTGAT CGATACATCT CTTCTACGGG CAAATGCGGC GCTCGTCAAC ACCCAGCGCC CCGATGAGGA GTTGCGAGCG TTTGCCCGTC GGGTACCGCT TGGTCGCTTA GGAACCCCGG AAGAGGTTGC TGCGGTGATC CTCTGCTTGC TCAGCCCGAC GGCTGGGTAC CTGACCGGTG CGGTTATTAC TGCCGATGGC GGCTGGGAAG CACGATTGTA A
|
Protein sequence | MEFQGKVAIV TGGAQGIGRA TALALAREGA AVVIADRDAA ATTALVEGIN AWGGRALAVI ADVSDESDAA RIANDTVLEF GGIDLLVNNA GIQQPGTIES TTLQLWQEII NVNLTGVFLV SRFVMPELRR RGGGAIVNVA SVYGLRAEAG WAAYAASKGG VIALTRAMAL DGAPDGIRVN CVCPGLIDTS LLRANAALVN TQRPDEELRA FARRVPLGRL GTPEEVAAVI LCLLSPTAGY LTGAVITADG GWEARL
|
| |