| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5502 |
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| Symbol | |
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| ID | 4042363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2245215 |
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| End bp | 2246030 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637980920 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_587630 |
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| Protein GI | 94314421 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCTC TCAAGAACAA GACGCTATTC GTCACCGGGG CGAGTCGCGG CATCGGCCTG
GCAATCGCAA AGCGGGCGGC TCAAGATGGT GCGAACATCG TCATCGCAGC CAAATCCGCC
GAGCCTCACC CCAAGCTACC AGGAACAATC TTCACAGCGG CTCGTGAAAT CGAAGAGGCA
GGCGGGACAG CTTTGCCTCT CGTCGTAGAT ATTCGTGACG AGCAACAAGT ACAGTCGGCA
GTGGACAAGG CCGTTGAACA TTTCGGAGGG ATTGACGTCT GCATCAACAA CGCCAGTGCA
ATCAGCAAGA CTGGCACATT GGCCACGGAC ATGAAACGGT TTGACTTGAT GCATAGCATC
AACACACGTG GCACGTATCT CGTCACGAGA ACTTGCCTTC CGCACCTTCT GAAGTCATCC
AACCCTCATG TCCTGATGCT CTCGCCTCCT CTGAATATGG AGGCGCGCTG GTTCTCGCCC
AATGTCGCTT ACACGATGGC GAAATTCGGC ATGAGCATGT GCGTGCTCGG GATGGCCGGG
GAGTTTCGTG GACAGGTGGC GATCAACGCT TTGTGGCCTC GGACCTTCGT TGGAACGGCG
GCCGTCCAGA ACATCTTGGG CGGCGAGACG ACTATGAAGC GCACCCGTCA CCCGGAGATC
GTCGCCGACG CTGCCTATGC CATCCTGACG AAGGACACAT CCTTCACCGG GAACTTCTGC
GTCGACGAAT CCGTCCTCCG TCAGGAAGGC GTTACCGATT TCAGCCAATA CAGCGACTGC
CCCGAATCCG ACCTGATCCC GGACTCGTTC GTTTAA
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| Protein sequence | MRSLKNKTLF VTGASRGIGL AIAKRAAQDG ANIVIAAKSA EPHPKLPGTI FTAAREIEEA
GGTALPLVVD IRDEQQVQSA VDKAVEHFGG IDVCINNASA ISKTGTLATD MKRFDLMHSI
NTRGTYLVTR TCLPHLLKSS NPHVLMLSPP LNMEARWFSP NVAYTMAKFG MSMCVLGMAG
EFRGQVAINA LWPRTFVGTA AVQNILGGET TMKRTRHPEI VADAAYAILT KDTSFTGNFC
VDESVLRQEG VTDFSQYSDC PESDLIPDSF V
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