| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3874 |
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| Symbol | |
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| ID | 4040568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 417439 |
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| End bp | 418209 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637979293 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_586011 |
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| Protein GI | 94312802 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.122974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.933314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCA CCCCCACCCT CACCTCTGCC TCCGCCGCCC TCTCGAACAA GGTAGCTTTC
GTCACCGGCG GATCGCGCGG CATCGGCGCC GCGGTAGTGC GGCGCCTGGC ACGCGAAGGC
GCCGCCGTGG CCTTCACCTA CCAGAGCTCC GGCGCGGTTG CGCAAGCGCT GGCTGAATCG
ATCCAGGCCG CAGGCGGCCG TGCCCGTGCC TATCACGCCG ACGCGGCCGA TGCCGCGGCC
GTCACACGTG CGATCGACGC GGCCGCCGCT GACTTCGGCA AGATCGACAT CCTCGTGAAC
AACGCCGGCG TGCTATTCCT CGGTCCGGTC GACACGTTCC CGCTGGAAGA CTTCGACAAG
ACGCTGGCCG TGAATGTACG CGCGGTATTT GTCGCCGCGA AGGCAGCGCT GGCGCACATG
GGCCAGGGTG GCCGCATCAT CAACATCGGC AGCACCAATG CGGACCGGAT GCCGTTCCCG
GGCGGCGCCG CCTACGCGAT GAGCAAGTCC GCCCTGAAAG GGCTGGTGCA AGGCATGGCA
CGCGACCTGG GACCGAAGGG CATCACGGTC AATAACGTGC AGCCTGGCCC GGTCAACACC
GACATGAACC CCGAGGACAG CGAATTCGCC GCATCGCTGC ACGGCCTGAT GGCGCTGCAA
CGTCATGCCC ACCCCGACGA GATCGCCAGC ATGGTGGCGT ATCTGGCCGG CCCTGAGGCT
GGATTCGTGA CGGGTGCCAG CCTCAACGTG GATGGCGGAT TCGCGGCTTG A
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| Protein sequence | MNSTPTLTSA SAALSNKVAF VTGGSRGIGA AVVRRLAREG AAVAFTYQSS GAVAQALAES
IQAAGGRARA YHADAADAAA VTRAIDAAAA DFGKIDILVN NAGVLFLGPV DTFPLEDFDK
TLAVNVRAVF VAAKAALAHM GQGGRIINIG STNADRMPFP GGAAYAMSKS ALKGLVQGMA
RDLGPKGITV NNVQPGPVNT DMNPEDSEFA ASLHGLMALQ RHAHPDEIAS MVAYLAGPEA
GFVTGASLNV DGGFAA
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