Gene M446_2373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2373 
Symbol 
ID6131461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2641711 
End bp2642565 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID641642597 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001769265 
Protein GI170740610 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.282253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCA AGGGCAAGAC CCTCTTCATC ACCGGCGCCT CGCGGGGCAT CGGGCTCGCC 
ATCGGGCTCA GGGCGGCCCG CGACGGCGCG AACGTGGCGA TCGCCGCCAA GACGACCGAG
CCGCACCCGA AGCTGGAGGG CACCATCCAC ACGGCCGCCG AGGCGATCGA GCGGGCGGGC
GGGACCGCGC TGCCCCTGGT CGTGGACGTG CGCGAGGAGG CGCAGGTGCG GGAGGCGATC
GACGCCACCG CGGCGCGCTT CGGCGGGCTC GACATCGTGG TGAACAACGC GAGCGCGATC
TCGCTCACCA CCACCCCGGC CACCGAGATG AAGCGCTTCG ATCTGATGCA TCAGATCAAC
ACGCGCGGGA CCTACGTCGT CTCGAAATAC GCGATCCCGC ACCTGGAGCG GGCGGAGAAC
CCGCACATCC TGATGCTGTC GCCGCCCCTC GACATGCAGG AGAAGTGGTT TTCGCCGCAC
CTCGCCTACA CGATGGCGAA GTTCGGCATG TCGCTGTGCG TGCTCGGCCT CGCGGGCGAG
CTGCGCCGCA AGGGCATCGC CGTGAACGCG CTCTGGCCGC GCACCACGAT CGCGACCGCC
GCGGTGAGGA ACCTGCTCGG CGGCGACGCG CTCATGCAGG CGAGCCGCAC CCCCGAGATC
CTGGCCGACG CCGCCTGGCG CATCTTCCAG AAGCCGGCGC GCGCGTTCAG CGGGCAGTTC
CTCATCGACG ACAGCTTCCT CGCCGCGGAG GGCGTCACGG ACTTCTCACA CTACCGCGTC
ACACCGGGCG TGCCGCTTGC GCCCGACTTC TTCGTGCCGG ATACGAGCGT GCCTCCGCCC
CACGCCCTCG ACTGA
 
Protein sequence
MSLKGKTLFI TGASRGIGLA IGLRAARDGA NVAIAAKTTE PHPKLEGTIH TAAEAIERAG 
GTALPLVVDV REEAQVREAI DATAARFGGL DIVVNNASAI SLTTTPATEM KRFDLMHQIN
TRGTYVVSKY AIPHLERAEN PHILMLSPPL DMQEKWFSPH LAYTMAKFGM SLCVLGLAGE
LRRKGIAVNA LWPRTTIATA AVRNLLGGDA LMQASRTPEI LADAAWRIFQ KPARAFSGQF
LIDDSFLAAE GVTDFSHYRV TPGVPLAPDF FVPDTSVPPP HALD