| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4014 |
|---|
| Symbol | |
|---|
| ID | 4881562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 4245902 |
|---|
| End bp | 4246756 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640141325 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001072279 |
|---|
| Protein GI | 126436588 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0877933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCT CAGGAAAGAC CATGTTCATA TCCGGCGCCA GCCGCGGTAT CGGGCTGGCC
ATCGCCAAGC GCGCTGCCGC CGACGGCGCC AACATTGCGC TTGTCGCCAA GACCGCCGAG
CCGCATCCGA AGTTGGAGGG AACGGTGTTC ACCGCGGCCA GGGAGATCGA AGCCGCCGGC
GGCCAGGCCC TGCCGATCGT CGGCGACGTG CGGGACGGCG ACTCGGTGGC CGCCGCGGTC
GCCAAGGCCG TCGAGCAGTT CGGCGGCATC GATATATGTG TCAACAACGC CTCGGCGATC
AACCTCGGCT CCATCGAGGA AGTTCCGCTG AAGCGTTTCG ACCTGATGAA CGGTATCCAG
GTCCGCGGCA CCTACACGGT TTCGCAAGCC TGCATTCCGC ACCTCAAGAG CGGGGACAAC
CCGCACATCC TCACGTTGTC GCCGCCGGTC CGGCTGGAGG CGCGGTGGCT CAAGCCGACC
GCATACATGA TGGCCAAGTT CGGCATGACC CTGTGCGCAC TGGGCATCGC CGAGGAGATG
CGCGAATACG GCATCGCCTC CAACACGCTG TGGCCGAGAA CCCTGGTGGC CACGGCGGCG
GTGCAGAATC TGCTCGGCGG GGACGAGGCG ATGGGCCGCG CCCGCCGGCC CGATGTCTAT
GCCGACGCGG CATACGTGGT TCTCAACAAG CCTGCCCGCG ACTACACCGG CCACAGCCTG
CTGTGTGAGG ACGTACTGCT GGAGTCCGGC GTACGGGATC TGTCGGCCTA TGACTGCGTA
CCCGGCGCTG AACTGGGACT CGACCTGTGG GTCGACTCTG CCAACCCGCC CGGCTACACC
GGCCCGCCAG CCTGA
|
|---|
| Protein sequence | MSLSGKTMFI SGASRGIGLA IAKRAAADGA NIALVAKTAE PHPKLEGTVF TAAREIEAAG
GQALPIVGDV RDGDSVAAAV AKAVEQFGGI DICVNNASAI NLGSIEEVPL KRFDLMNGIQ
VRGTYTVSQA CIPHLKSGDN PHILTLSPPV RLEARWLKPT AYMMAKFGMT LCALGIAEEM
REYGIASNTL WPRTLVATAA VQNLLGGDEA MGRARRPDVY ADAAYVVLNK PARDYTGHSL
LCEDVLLESG VRDLSAYDCV PGAELGLDLW VDSANPPGYT GPPA
|
|---|
| |