Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3798 |
Symbol | |
ID | 4112629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4051473 |
End bp | 4052213 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638032937 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_640960 |
Protein GI | 108800763 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.317605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCTCG CCGGGAAGGT CGCCTTCGTC GCCGGCGCCA GCCGTGGCAT CGGCGCGACG GTGGCGAAAG CCCTCGCCGC AGAAGGCGCT GCCGTGGCAG TCGCCGCCCG GTCCGAGCAG CCGGGCAAGT TACCGGGGAC CATCCATACG GTGGCCGAGT CCATCACCGC GTCCGGCGGC CGTGCGCTAC CGGTGTCGTG TGACGTCACC GATGAATCGT CAGTGGAAAC CGCAGTGGCC GAGACCGTTT CGGAATTCGG CGGAATCGAC ATCCTGGTCG CGAACGCCGG GGTGCTGTGG CTCGGCCCGA TCGAGTCGAC GCCGCTGAAG CGTTGGCAGC TGTGCCTGAA CGTCAACCTC ACCGGCGTGT TCCTCGTGAC GAAGGCAGTC ATCCCCCACG TGCGCGCGCG TGGCGGCGGA TCCCTGATCG CGGTGACGAC CACCGGCGTG ACCATGACCG ACCAGGGTTC GAACGCGTAC TGGGTGTCCA AGGCCGCCGC CGAACGGCTC TACCTCGGGT TGGCGGCCGA CCTGCGGGCC GACAACATCG CGGTGAACTG CCTGAGCCCC TCGCGCGTCG TGCTCACCGA GGGCTGGCAG GCCGGCGGCG CGGGCATGGA GATCCCACCG GAGATGGTCG AGCCCCCGGA GGCCATGGGG CGCGCGGCCG TGCTGCTGGC GGCACAGGAC GCCAGCGGGA TCACCGGAAC GATCCAACGC TCCGAAGAGG TTGTGCGCTA G
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Protein sequence | MSLAGKVAFV AGASRGIGAT VAKALAAEGA AVAVAARSEQ PGKLPGTIHT VAESITASGG RALPVSCDVT DESSVETAVA ETVSEFGGID ILVANAGVLW LGPIESTPLK RWQLCLNVNL TGVFLVTKAV IPHVRARGGG SLIAVTTTGV TMTDQGSNAY WVSKAAAERL YLGLAADLRA DNIAVNCLSP SRVVLTEGWQ AGGAGMEIPP EMVEPPEAMG RAAVLLAAQD ASGITGTIQR SEEVVR
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