| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3003 |
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| Symbol | |
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| ID | 4956531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 3266290 |
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| End bp | 3267063 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640182192 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001114331 |
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| Protein GI | 134300835 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.605713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGT TTGATTTATC AGGTAAAGTT GCGGTTATTA CCGGAGCATC CAGCGGTTTA
GGAGCCGATG CGGCAAGGGC CTACGCTGCA CAAGGTGCTG ATGTGGCCCT TTTAGCCAGA
AGGAAAACAA AACTCGATCA GGTTGTGAAG GAAATTGAAG CCACCGGCAA AAAAGCCATT
GCCGTACAGT GTGACGTTTC TAACGAGGAA AACGTTAAAC AAGCCGTTGA AGAAATATTG
TCTCATTACG GTAAAATTGA CATTCTGCTT AATAATGCCG GCATTGCAAT TAAAGGTTCT
GTGGAAAACA TGACGGTAGA ACAATGGGAT ACTGCGATGG ATATTAATGT AAAAGGTATT
TTTTTGATGT GTAAATATAT CGTTCCTCAG ATGAAGCAGC GTAAGTATGG AAAGATTATC
AACGTTGCTT CTGTCAATGC GATTATAGCA GATAAGGCCG AACCACTGGT TCGCCACTCT
TATAATACAT CGAAAAGTGC AGTGCTTGGC TTAACCACTG GTATGGCAGT TTCTCTGGCC
CAGTATGGGA TTACTGTTAA CGCAGTGGGC CCAGGCCTTT TTGAATCGGA GATGACTGCG
GATACTTTAT TTAAGGAAGA AAGCTTCCTG CAGATGTACA ACTCACTTTG CCCGGCTTCC
AGACCGGGGC GTAAAGGCGA GCTTAATGGA CCAATTTTAT TCTTTTCTTC TGATGCATCC
AGTTATACCA CTGGACAGTT TATTACAGTG GATGGCGGAT TGACTGCGGT TTAG
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| Protein sequence | MNLFDLSGKV AVITGASSGL GADAARAYAA QGADVALLAR RKTKLDQVVK EIEATGKKAI
AVQCDVSNEE NVKQAVEEIL SHYGKIDILL NNAGIAIKGS VENMTVEQWD TAMDINVKGI
FLMCKYIVPQ MKQRKYGKII NVASVNAIIA DKAEPLVRHS YNTSKSAVLG LTTGMAVSLA
QYGITVNAVG PGLFESEMTA DTLFKEESFL QMYNSLCPAS RPGRKGELNG PILFFSSDAS
SYTTGQFITV DGGLTAV
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