Gene Reut_B3486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B3486 
Symbol 
ID3612889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp23745 
End bp24488 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID637692913 
Productshort chain dehydrogenase 
Protein accessionYP_297688 
Protein GI73537321 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.425497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCA CTCTTTCCGG CAAGATTGCC TTCGTCACCG GCGGCGCGCG CGGTATCGGC 
GCTTCGGTCG TACGCCGGCT GGCGCGCGAA GGCGCGGCTG TGGCCTTTAC CTATCAGAGT
TCGGGAGCTG GTGCGCACGC ACTGGCGGAG GAAATCCATG CCGCCGGCGG ACGCGCACTG
GCCTTCCAGG CTGATGCGGC GGACGCGGCT TCCGTGACGC GTGCCGTCGA TGATGCCGCC
CGGCAGTTCG GCAAGATCGA CATCCTCGTC AATAGTGCCG GCGTGCTGCT GCTGGGCCCG
GTCGACGACT TTTCGCTCGA AGATTTCGAC AAGACGCTTG CGGTGAATGT GCGCGGCGTG
TTTGTGGCAG CCAAGGCAGC ACTGCCCCAC ATGGGCGACG GCGGCCGCAT CATCAATATC
GGCAGCGTCA ACGCGGATCG CATTCCGTTC GCCGGAGGCA GCGCCTATGC CATGAGCAAG
GCCGCGCTGA AGGGCCTGGT GCAGGGCATG GCGCGCGATC TCGGACCCAG GGGCATTACC
GTGAACAACG TGCAGCCGGG TCCGACCAAC ACCGACATGA ACCCCGAGCA CAGCGACTTT
GCGACATCGC TGCATGGCCT GATGGCATTG CAGCGCCACG CGCGGCCCGA AGAGATCGCT
GGCATGGTGG CGTACCTCGC CGGCCCGGAA GCAGGCTTCG TCACCGGTGC CAGCCTGAAT
ATCGACGGTG GCTTCGCCGC CTGA
 
Protein sequence
MSTTLSGKIA FVTGGARGIG ASVVRRLARE GAAVAFTYQS SGAGAHALAE EIHAAGGRAL 
AFQADAADAA SVTRAVDDAA RQFGKIDILV NSAGVLLLGP VDDFSLEDFD KTLAVNVRGV
FVAAKAALPH MGDGGRIINI GSVNADRIPF AGGSAYAMSK AALKGLVQGM ARDLGPRGIT
VNNVQPGPTN TDMNPEHSDF ATSLHGLMAL QRHARPEEIA GMVAYLAGPE AGFVTGASLN
IDGGFAA