Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B3486 |
Symbol | |
ID | 3612889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | - |
Start bp | 23745 |
End bp | 24488 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637692913 |
Product | short chain dehydrogenase |
Protein accession | YP_297688 |
Protein GI | 73537321 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.425497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCACCA CTCTTTCCGG CAAGATTGCC TTCGTCACCG GCGGCGCGCG CGGTATCGGC GCTTCGGTCG TACGCCGGCT GGCGCGCGAA GGCGCGGCTG TGGCCTTTAC CTATCAGAGT TCGGGAGCTG GTGCGCACGC ACTGGCGGAG GAAATCCATG CCGCCGGCGG ACGCGCACTG GCCTTCCAGG CTGATGCGGC GGACGCGGCT TCCGTGACGC GTGCCGTCGA TGATGCCGCC CGGCAGTTCG GCAAGATCGA CATCCTCGTC AATAGTGCCG GCGTGCTGCT GCTGGGCCCG GTCGACGACT TTTCGCTCGA AGATTTCGAC AAGACGCTTG CGGTGAATGT GCGCGGCGTG TTTGTGGCAG CCAAGGCAGC ACTGCCCCAC ATGGGCGACG GCGGCCGCAT CATCAATATC GGCAGCGTCA ACGCGGATCG CATTCCGTTC GCCGGAGGCA GCGCCTATGC CATGAGCAAG GCCGCGCTGA AGGGCCTGGT GCAGGGCATG GCGCGCGATC TCGGACCCAG GGGCATTACC GTGAACAACG TGCAGCCGGG TCCGACCAAC ACCGACATGA ACCCCGAGCA CAGCGACTTT GCGACATCGC TGCATGGCCT GATGGCATTG CAGCGCCACG CGCGGCCCGA AGAGATCGCT GGCATGGTGG CGTACCTCGC CGGCCCGGAA GCAGGCTTCG TCACCGGTGC CAGCCTGAAT ATCGACGGTG GCTTCGCCGC CTGA
|
Protein sequence | MSTTLSGKIA FVTGGARGIG ASVVRRLARE GAAVAFTYQS SGAGAHALAE EIHAAGGRAL AFQADAADAA SVTRAVDDAA RQFGKIDILV NSAGVLLLGP VDDFSLEDFD KTLAVNVRGV FVAAKAALPH MGDGGRIINI GSVNADRIPF AGGSAYAMSK AALKGLVQGM ARDLGPRGIT VNNVQPGPTN TDMNPEHSDF ATSLHGLMAL QRHARPEEIA GMVAYLAGPE AGFVTGASLN IDGGFAA
|
| |