Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3827 |
Symbol | |
ID | 4112657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4073129 |
End bp | 4073986 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638032965 |
Product | short chain dehydrogenase |
Protein accession | YP_640988 |
Protein GI | 108800791 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.393449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAGCG AACAACGGGT GCCCAGCCAA CGGACGTTGA CTGATCGCAC CCTGGTGGTG TCCGGCGGAA GCCGCGGCAT CGGTCTGGCG ATCGCGATCG GCGCGGCCCG CCAGGGCGCC AACGTCGTCT TGCTCGCCAA GACCGCCGAA CCGCACCCCA AACTGCCCGG CACCGTGCAC ACCGCCGTCG CCGACGTCGA AGCCGCCGGC GGTAAGGCCG TCGCCGTAGT CGGGGACGTC CGCAAGGAAG AAGACGTCGC GCGCGCCGTC GACACCGCGG TCGAGCACTT CGGCGGCATC GACATCTGCG TCAACAACGC CAGCGCCATC GCCACCGAAC CGACCGAACA GCTGTCGGCC AAGAAGTTCG ATCTGATGAT GGACATCAAC GTCCGCGGCA CCTTTCTGCT GACGAAGGCC TGCCTGCCGC ATCTGCGCGA ATCGCCCAAC CCGCACGTGC TCACGCTGGC ACCGCCGCTG AACATGAACC CGCACTGGCT GGGCGCCCAC CCGGCGTACA CCCTGTCGAA GTACGGGATG ACGCTGCTGT CGCTCGGCTG GGCTGCCGAA TACGCCGAGG CTGGGATCGC GTTCAACTGC CTGTGGCCGG AGACCTACAT CGCCACCTCG GCGGTGGCCA ACATCGGCGC CGACGCACTG AAGACGTCGC GTGATCCGCA GATCATGGCC GACGCCGCGG TCGAGGTGCT GTCCCGCCCC GCGCGCGAGA CCACCGGTCA GTGCTTCATC GACTCGGCCG TGCTCGCTTC GGCCGGGGTG AGCGACCTGT CGCGTTACGG TGGCGGGGAC AACCCGACCC TCGACATCTT CGTCGACAAG GCACTGGACA AGTCATGA
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Protein sequence | MPSEQRVPSQ RTLTDRTLVV SGGSRGIGLA IAIGAARQGA NVVLLAKTAE PHPKLPGTVH TAVADVEAAG GKAVAVVGDV RKEEDVARAV DTAVEHFGGI DICVNNASAI ATEPTEQLSA KKFDLMMDIN VRGTFLLTKA CLPHLRESPN PHVLTLAPPL NMNPHWLGAH PAYTLSKYGM TLLSLGWAAE YAEAGIAFNC LWPETYIATS AVANIGADAL KTSRDPQIMA DAAVEVLSRP ARETTGQCFI DSAVLASAGV SDLSRYGGGD NPTLDIFVDK ALDKS
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