Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mjls_4153 |
Symbol | |
ID | 4879859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. JLS |
Kingdom | Bacteria |
Replicon accession | NC_009077 |
Strand | + |
Start bp | 4388138 |
End bp | 4389001 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640141462 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001072416 |
Protein GI | 126436725 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0668382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.810998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTACTC CCGATCCTCG CACCCTGAGA AATCGCGTCG TCGTGGTGAC CGGAGCCAGC CGCGGCATCG GTGCGGCCAT CGCCGTCCGC GCCGGTGCCG ACGGCGCCGC CGTGGCGCTG CTGGCCAAGA CCGAAACGCC CAACCCCAAG ATCGCGGGCA CCCTGGCCCA GACCGCGGAC GCCGTGCAAC GCGCGGGCGG GCGGGCGCTG CCGGTGGCCT GCGACGTGCG CGACACCGGC GCAGTGGCGG CCGCGATCGC CACGATCGCT GAGGAATTCG GCGCCATCGA CATCGTGGTC AACAATGCCG GTGCCCTGGA CCTGCGGCCG ACCGCACAAC TTCCCCCGAA GAACCTGCGT CGGCTGTTGG AGGTCAACGT CGAAGGGCCG TTCGCGGTGG TGCAGGCCGC CCTTCCCCAT CTGCGCCAGT CGAGCAACGC GCACATCGTC AACATCTCAC CGCCGCTGAA CCTGGCGCCG CAATGGGTTG GCGCGCATGT GGGACACACC GTCGGCAAGT ACGCCGAGAG CCTGCTGACC CTGGGCTGGG CCGAGGAGTT CGCGTCCGTG CCGATCGCGG TGAACTCACT GTGGCCGGCC ACCACGATCG CGAGTACCGG AATGATGGTC GCGATGGGCG ACGCCACGGT GCGGGCGCAG GCCCGCAGCC CGCAGATCAT GGCCGACGCG GTGCACGCCC TGGTCACCCG ACCCGCCGCA GCATGCAGCG GCCACTTCTA CACCGACGAG GAGATCCTGC TCGAGGAGGG CAGCGGCGAC CTGTCGGACT ACCGACTGGC CGAGCGCGAC GAGGACCTCA CGCCCAACTT CTACCTCCCG TCGAGCCCGC TGCCCGCCCG ATGA
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Protein sequence | MVTPDPRTLR NRVVVVTGAS RGIGAAIAVR AGADGAAVAL LAKTETPNPK IAGTLAQTAD AVQRAGGRAL PVACDVRDTG AVAAAIATIA EEFGAIDIVV NNAGALDLRP TAQLPPKNLR RLLEVNVEGP FAVVQAALPH LRQSSNAHIV NISPPLNLAP QWVGAHVGHT VGKYAESLLT LGWAEEFASV PIAVNSLWPA TTIASTGMMV AMGDATVRAQ ARSPQIMADA VHALVTRPAA ACSGHFYTDE EILLEEGSGD LSDYRLAERD EDLTPNFYLP SSPLPAR
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