Gene Caul_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0159 
Symbol 
ID5897871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp179531 
End bp180280 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID641560643 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001681794 
Protein GI167644131 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.410897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.168063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGG ATTTGAGCGG CCGCGTGGCC CTGGTCACCG GCGCGTCGTC GGGTTTCGGC 
GAGGCCGTGG CCCTGGACCT GGCCAAGGCC GGCGCCAAGG TCGCCCTGGC GGCGCGGCGC
GAGGATCGCC TGCGCGCCCT GGCCCAGCGA ATCACCGACG CGGGCGGCCA AGCCCAGGTG
ATCGTCGCCG ACTTCACCGA TGAGCATCAG GCCCAGCGGG CGGTGCGCGA GACCGAGGCC
GCCTTCGGCT GGCTGGACAT CCTGATCAAC AACGCCGGGG TCATGTACCT GGAGCCGGTG
GCCACGGCCG ATCTTGGCCG TTGGCGGTCG ATGCTGGAGC TGAACCTGCT GGGCCTGATC
GCCGCCACCC AGGCCGCCCT GCCCGGCATG ACCGCCCGCA AGGACGGCCA CATCGTCAAC
ATCGCCTCGA CCGCCGGTCA CATCGCCAAC CCGCTCTCGG CCGCCTATTC GGCCAGCAAG
TTCGGCGTGA TCGGCTTCTC GGAATCGCTG CGCAAGGAGG TCCATAAGGA CAATATCCGG
GTGACGGTGA TCTCGCCGGG CATGGCCGCG ACCGAACTGC GTGACCATAT CGCCGTCGAG
GCCGTGCAGA GCGCGCTCAA CAAGACCGCC GAGACCATGC GCCAACTGAC CGCCGAGGAC
GTGGCCGACG CCATCCTCTA CGCGGTGTCG CGACCGCCGC ACGTGATGAT CAACGAGATC
CTGATGCGCT CGACGGACCA GGAGCGGTAG
 
Protein sequence
MSMDLSGRVA LVTGASSGFG EAVALDLAKA GAKVALAARR EDRLRALAQR ITDAGGQAQV 
IVADFTDEHQ AQRAVRETEA AFGWLDILIN NAGVMYLEPV ATADLGRWRS MLELNLLGLI
AATQAALPGM TARKDGHIVN IASTAGHIAN PLSAAYSASK FGVIGFSESL RKEVHKDNIR
VTVISPGMAA TELRDHIAVE AVQSALNKTA ETMRQLTAED VADAILYAVS RPPHVMINEI
LMRSTDQER