Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0159 |
Symbol | |
ID | 5897871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 179531 |
End bp | 180280 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641560643 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001681794 |
Protein GI | 167644131 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.410897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.168063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGG ATTTGAGCGG CCGCGTGGCC CTGGTCACCG GCGCGTCGTC GGGTTTCGGC GAGGCCGTGG CCCTGGACCT GGCCAAGGCC GGCGCCAAGG TCGCCCTGGC GGCGCGGCGC GAGGATCGCC TGCGCGCCCT GGCCCAGCGA ATCACCGACG CGGGCGGCCA AGCCCAGGTG ATCGTCGCCG ACTTCACCGA TGAGCATCAG GCCCAGCGGG CGGTGCGCGA GACCGAGGCC GCCTTCGGCT GGCTGGACAT CCTGATCAAC AACGCCGGGG TCATGTACCT GGAGCCGGTG GCCACGGCCG ATCTTGGCCG TTGGCGGTCG ATGCTGGAGC TGAACCTGCT GGGCCTGATC GCCGCCACCC AGGCCGCCCT GCCCGGCATG ACCGCCCGCA AGGACGGCCA CATCGTCAAC ATCGCCTCGA CCGCCGGTCA CATCGCCAAC CCGCTCTCGG CCGCCTATTC GGCCAGCAAG TTCGGCGTGA TCGGCTTCTC GGAATCGCTG CGCAAGGAGG TCCATAAGGA CAATATCCGG GTGACGGTGA TCTCGCCGGG CATGGCCGCG ACCGAACTGC GTGACCATAT CGCCGTCGAG GCCGTGCAGA GCGCGCTCAA CAAGACCGCC GAGACCATGC GCCAACTGAC CGCCGAGGAC GTGGCCGACG CCATCCTCTA CGCGGTGTCG CGACCGCCGC ACGTGATGAT CAACGAGATC CTGATGCGCT CGACGGACCA GGAGCGGTAG
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Protein sequence | MSMDLSGRVA LVTGASSGFG EAVALDLAKA GAKVALAARR EDRLRALAQR ITDAGGQAQV IVADFTDEHQ AQRAVRETEA AFGWLDILIN NAGVMYLEPV ATADLGRWRS MLELNLLGLI AATQAALPGM TARKDGHIVN IASTAGHIAN PLSAAYSASK FGVIGFSESL RKEVHKDNIR VTVISPGMAA TELRDHIAVE AVQSALNKTA ETMRQLTAED VADAILYAVS RPPHVMINEI LMRSTDQER
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