| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4069 |
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| Symbol | |
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| ID | 6411753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4371640 |
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| End bp | 4372359 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713951 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001993040 |
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| Protein GI | 192292435 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0596677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTCG TCGGCAAGGC CGCGCTGGTC ACCGGCGGCA GTAAGGGCAT CGGTTTTGCG
ATCGCGCAGG CGCTGGCGCA GGCCGGCGCG TCGGTGATGA TCTGCGCCCG CGACGAGAGC
GAGATCGCGC AGGCGCTGCC GGCGCTGCGC AACGGCGTCC GCGGCCGGGT TCATGGTCTC
GCATGCGACG TCCGCGACGA GGCCGAGGTA CGCCAGCTGG TCGACCACAC CGTCACCGCG
TTCGATGGCC TCGACATCCT GGTCAACAAC GCCGGGGTCG GTCTGCTCGG GCCGGTCGAG
ACGTTTCCGC CGGAGCACTG GCGGCTCACC CTCGATACCA ACCTCACCGG CGCGTTCTAT
TGCTGCCACT ACGCGATCCC AGCGCTGAAG GCGCGCGGCG GCGGCGCCAT CGTCAACATC
GGCAGCCGCT CCAGCGTCAA CGCCTATGGC GGCGGCGCGG CGTATTGCGC CTCGAAATTC
GGCCTGCTCG GGCTGTCGGA GTCGCTGCTG CAGGAGCTGC ATCCGTTCGG CATCCGTGTC
AGTTGCGTGA TGCCGGGCCG GGTCGCCACC GATTTTGCCG GCGAGCCGCC GCAGGACTGG
CACCTGTCCG CCGACGATGT CGCGCAGGCG GTGATCGATG TGCTGTCGTT CGCGCCGCGC
GCGCTGGCGA GCCGGATCGA GCTGCGGCCG GCGCGGCCGC CATCGCCGGC ACCGCGATGA
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| Protein sequence | MSFVGKAALV TGGSKGIGFA IAQALAQAGA SVMICARDES EIAQALPALR NGVRGRVHGL
ACDVRDEAEV RQLVDHTVTA FDGLDILVNN AGVGLLGPVE TFPPEHWRLT LDTNLTGAFY
CCHYAIPALK ARGGGAIVNI GSRSSVNAYG GGAAYCASKF GLLGLSESLL QELHPFGIRV
SCVMPGRVAT DFAGEPPQDW HLSADDVAQA VIDVLSFAPR ALASRIELRP ARPPSPAPR
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