| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1306 |
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| Symbol | |
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| ID | 3833614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1540777 |
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| End bp | 1541610 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637825396 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_426394 |
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| Protein GI | 83592642 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.174791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC CGTCGCCTTC ACTTGCCGGC AAGACCCTGT TCATTTCGGG GGCCAGCCGG
GGCATCGGCA AGGCCATCGC CCTGCGCGCC GCCCAAGATG GCGCCAATAT CGCCATCATC
GCCAAGACCA GCGACCCCAA CCCCAAACTG CCCGGCACCA TCCACAGCGC GGCGACCGAG
ATCGAAGCCG CCGGCGGCAA GGCCCTGGCC CTGGCCGTGG ATATCCGCGA CGAGGCGGCG
ATCGCCGATG CCGTCGCCCG CACCCTGGAA ACCTTCGGCG GCATCGATAT CGTCATCAAC
AACGCCAGCG CCATCAGCCT GTCGACCACC GCCGAAACGC CGATGAAGCG CTTCGATCTG
ATGGTCGGCA TCAACACGCG CGGCACCTTC GCCGTCACCC AGGCCTGCCT GCCGGCCCTG
CGCAAGGCGG CCAATCCCCA TATCCTGACG CTGTCGCCGC CGCCCTCGCT CGATCCCCGC
TGGTTCGGCC CCCATGTCGC CTATACGATC AGCAAGATGG GGATGAGCCT CTGCGTGCTC
GGCTGGGCCG AGGAATTCCG CGAGGCCGGC ATCGCCGCCA ACGCCCTGTG GCCGCGCACG
GTGATCGATA CCGCCGCCTT GCGCATGCTG GGCGGCGCGG TCAAGCCGGA GTTCTGCCGC
AAGCCCGAGA TCGTCGCCGA CGCCGCCCAC GCCATCCTGA CCCGTGACGC CCGCGCCTGC
ACCGGCCACT TTTTCCTCGA TGACGAGGTT CTGGCCGAAG AGGGCATCAC CGACCTGACC
GCCTACGCCG TCTCCCCCGG CCACCCTCTG CTCCCCGATC TGTTCTTGGA GTGA
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| Protein sequence | MTDPSPSLAG KTLFISGASR GIGKAIALRA AQDGANIAII AKTSDPNPKL PGTIHSAATE
IEAAGGKALA LAVDIRDEAA IADAVARTLE TFGGIDIVIN NASAISLSTT AETPMKRFDL
MVGINTRGTF AVTQACLPAL RKAANPHILT LSPPPSLDPR WFGPHVAYTI SKMGMSLCVL
GWAEEFREAG IAANALWPRT VIDTAALRML GGAVKPEFCR KPEIVADAAH AILTRDARAC
TGHFFLDDEV LAEEGITDLT AYAVSPGHPL LPDLFLE
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