| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3812 |
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| Symbol | |
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| ID | 6204773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4952425 |
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| End bp | 4953192 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693480 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001820687 |
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| Protein GI | 182415621 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.466174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.349855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACTC ACACGAAACC CAAACTCTTC GGCAAAGTCG CCCTTGTCAC CGGCGCGTCC
AAAGGCATTG GCGCGTCGAT TGCCCTGCAC CTCGGCGAAG CCGGGGCGGC GGTCGTCGTC
AACTACACCA GCAGCCGCGA AGGCGCCGAG CGCGTCGCCG GCCAGATCAC ACAGCACGGC
GGTCGCGCGG TTGCCGTGCA AGCCGACGTA TCGAAGCGCG CCGACATCGA CCGCCTGTTC
GCCGAGACGA TCGCGGCCTT CGGCCGGCTC GACATCCTGG TGAACAACGC GGGCGTCTAC
GATTTCGCCC CGCTCGGCCA GATCACCGAG GCGCATTTCC ACCGGCACTT CGACGTGAAC
GTCCTCGGCC TGCTGCTGGC CACGCAGAAA GCGGTCGATC ACTTCGACGA ACACGGCGGC
GTCATCATCA ACGTCGGGTC GATCGTGAGC ACGTTCGCCC TGGCGAACGG CTCGGGCTAC
AGCGCGACCA AAGCCGCCGT CGACGCCATC ACGCGCTCGC TCGCCAAGGA GCTCGGTGCC
CGCCGCATCC GCGTCAACTC GCTCAACCCC GGCGCCGTCG ACACCGAGGG CAGTCGCGCG
GGCGGAATCA TCGGCAGCGA TTTCGAGAAA CAGATCATCC AGGACACGCC GCTCGGCCGG
ACGGGGCAGC CGGACGACAT CGGACGCGTG GCGGTGTTTC TCGCCTCCGG GGATTCCGGT
TGGATCACCG GCGAGACGAT CGCGGTGGCG GGCGGACACC CGCACTGA
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| Protein sequence | MSTHTKPKLF GKVALVTGAS KGIGASIALH LGEAGAAVVV NYTSSREGAE RVAGQITQHG
GRAVAVQADV SKRADIDRLF AETIAAFGRL DILVNNAGVY DFAPLGQITE AHFHRHFDVN
VLGLLLATQK AVDHFDEHGG VIINVGSIVS TFALANGSGY SATKAAVDAI TRSLAKELGA
RRIRVNSLNP GAVDTEGSRA GGIIGSDFEK QIIQDTPLGR TGQPDDIGRV AVFLASGDSG
WITGETIAVA GGHPH
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