| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3612 |
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| Symbol | |
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| ID | 5832703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 3992798 |
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| End bp | 3993667 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641369405 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001641061 |
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| Protein GI | 163853018 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.225271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGA AGGGCAAGAG TCTGAAGGGC AAGACGCTGT TCATCACCGG CGCCTCGCGC
GGCATCGGGC TCGCCATCGG CCTGCGCGCC GCCCGCGACG GCGCCAACGT GGCGATCGCC
GCCAAGACCG CAGAGGTGCA TCCGAAGCTG GAGGGCACGA TCTTCACCGC CGCCGAAGCC
ATCGAGCGGG CAGGGGGCCG GGCGCTGCCG CTCACCGTCG ATGTCCGCGA CGAAGAGGCG
GTGAAGACGG CGCTGGATGA AACCGCAAAA CAATTCGGCG GGATCGACAT CGTGGTCAAC
AACGCGAGCG CGATCTCGCT GTCGAACACG CCCAAGACCG AGATGAAGCG CTTCGACCTG
ATGCATCAGA TCAACACGCG CGGCACCTAC ATGGTCAGCA AATACGCGAT TCCGCATCTG
GAGCGGGCGG AGAACCCGCA CATCCTGATG CTCTCGCCGC CGCTCGACAT GGCGGAGAAA
TGGTTCGCGC CGCATCTGGC CTACTCGATG GCCAAGTTCG GCATGTCGCT CTGTGTGCTG
GGTCTGGCCG GAGAACTTCG GGGCCGGGGT ATCGCCGTCA ACGCCCTGTG GCCGCGCACC
ACCATCGCCA CGGCCGCCGT TCAGAACCTG CTCGGCGGCG ACGCGCTGAT GCAGGCGAGC
CGCACGCCGG CGATCATGGC GGATGCCGCG CACGCCGTGT TCCTGCGGGA GGCCAAGGGC
TTCACCGGGC ATTTCCTCAT CGATGACACG GTTCTGAGTG AGGAAGGCGT CACGGACTTT
TCAAAATACC GCGTCACAGC AGGCGTTCCG CTTGCGCCGG ACTTCTTCGT GCCGGACACA
AGCGTCGCCC CGCCCGGGGC ACTCGACTGA
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| Protein sequence | MSLKGKSLKG KTLFITGASR GIGLAIGLRA ARDGANVAIA AKTAEVHPKL EGTIFTAAEA
IERAGGRALP LTVDVRDEEA VKTALDETAK QFGGIDIVVN NASAISLSNT PKTEMKRFDL
MHQINTRGTY MVSKYAIPHL ERAENPHILM LSPPLDMAEK WFAPHLAYSM AKFGMSLCVL
GLAGELRGRG IAVNALWPRT TIATAAVQNL LGGDALMQAS RTPAIMADAA HAVFLREAKG
FTGHFLIDDT VLSEEGVTDF SKYRVTAGVP LAPDFFVPDT SVAPPGALD
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