More than 300 homologs were found in PanDaTox collection
for query gene Daro_1445 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_1445  two component LuxR family transcriptional regulator  100 
 
 
308 aa  623  1e-177  Dechloromonas aromatica RCB  Bacteria  normal  0.446624  normal 
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  65.36 
 
 
333 aa  392  1e-108  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  62.3 
 
 
311 aa  382  1e-105  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3397  two component LuxR family transcriptional regulator  61.89 
 
 
328 aa  372  1e-102  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  58.9 
 
 
353 aa  365  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  58.93 
 
 
336 aa  365  1e-100  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  60.97 
 
 
316 aa  363  2e-99  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_1354  two component LuxR family transcriptional regulator  56.97 
 
 
349 aa  355  5e-97  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1731  response regulator receiver protein  56.38 
 
 
361 aa  352  4e-96  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.319975 
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  56.29 
 
 
356 aa  347  1e-94  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0974  two component LuxR family transcriptional regulator  46.49 
 
 
309 aa  263  3e-69  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.883175  normal  0.426964 
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  49.16 
 
 
306 aa  255  6e-67  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal 
 
 
-
 
NC_011369  Rleg2_3066  two component transcriptional regulator, LuxR family  48.97 
 
 
305 aa  253  2.0000000000000002e-66  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  44.88 
 
 
305 aa  252  5.000000000000001e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  45.95 
 
 
292 aa  251  9.000000000000001e-66  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_009620  Smed_4179  response regulator receiver protein  46.33 
 
 
309 aa  249  3e-65  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.15819 
 
 
-
 
NC_010725  Mpop_3574  two component transcriptional regulator, LuxR family  47.9 
 
 
301 aa  248  1e-64  Methylobacterium populi BJ001  Bacteria  normal  0.0249095  normal 
 
 
-
 
NC_010511  M446_0591  two component LuxR family transcriptional regulator  48.18 
 
 
301 aa  248  1e-64  Methylobacterium sp. 4-46  Bacteria  normal  0.477799  hitchhiker  0.00469436 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  44.95 
 
 
361 aa  246  3e-64  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal 
 
 
-
 
NC_011757  Mchl_3692  two component transcriptional regulator, LuxR family  47.57 
 
 
300 aa  243  1.9999999999999999e-63  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.170876  normal 
 
 
-
 
NC_010172  Mext_3383  response regulator receiver  47.57 
 
 
300 aa  244  1.9999999999999999e-63  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0562  two component LuxR family transcriptional regulator  47.37 
 
 
297 aa  243  3.9999999999999997e-63  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3321  two component transcriptional regulator, LuxR family  47.26 
 
 
305 aa  242  5e-63  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.536368 
 
 
-
 
NC_011666  Msil_2002  two component transcriptional regulator, LuxR family  45.07 
 
 
306 aa  240  2e-62  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_0218  two component LuxR family transcriptional regulator  45.1 
 
 
339 aa  240  2e-62  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5666  two component LuxR family transcriptional regulator  46.84 
 
 
312 aa  239  2.9999999999999997e-62  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.917296 
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  44.92 
 
 
312 aa  239  4e-62  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3866  response regulator receiver  45.76 
 
 
309 aa  239  5.999999999999999e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.370865  normal 
 
 
-
 
NC_007778  RPB_1250  two component LuxR family transcriptional regulator  45.08 
 
 
309 aa  238  8e-62  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886948  normal 
 
 
-
 
NC_008061  Bcen_3730  two component LuxR family transcriptional regulator  45.85 
 
 
312 aa  236  3e-61  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4638  two component LuxR family transcriptional regulator  45.85 
 
 
312 aa  236  3e-61  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1441  two component transcriptional regulator, LuxR family  45.39 
 
 
308 aa  235  8e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  43.19 
 
 
303 aa  235  9e-61  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.13601 
 
 
-
 
NC_010505  Mrad2831_5514  two component LuxR family transcriptional regulator  48.31 
 
 
305 aa  231  8.000000000000001e-60  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.211273 
 
 
-
 
NC_009654  Mmwyl1_0962  response regulator receiver protein  44.7 
 
 
304 aa  230  2e-59  Marinomonas sp. MWYL1  Bacteria  normal  0.512477  normal 
 
 
-
 
NC_008740  Maqu_3869  response regulator receiver protein  46 
 
 
301 aa  226  5.0000000000000005e-58  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00878  two-component response regulator  41 
 
 
298 aa  214  1.9999999999999998e-54  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  41.81 
 
 
295 aa  211  1e-53  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  39.62 
 
 
301 aa  188  1e-46  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_007794  Saro_1665  two component LuxR family transcriptional regulator  38.97 
 
 
307 aa  183  3e-45  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_3147  two component transcriptional regulator, LuxR family  53.66 
 
 
302 aa  175  8e-43  Variovorax paradoxus S110  Bacteria  normal  0.235206  n/a   
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  56.25 
 
 
222 aa  157  3e-37  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  49.29 
 
 
488 aa  143  4e-33  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  45.52 
 
 
407 aa  136  4e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  53.45 
 
 
566 aa  134  9.999999999999999e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  53.33 
 
 
367 aa  134  9.999999999999999e-31  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  51.02 
 
 
541 aa  132  5e-30  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  47.26 
 
 
397 aa  131  1.0000000000000001e-29  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  46.67 
 
 
452 aa  131  2.0000000000000002e-29  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  40.99 
 
 
440 aa  130  2.0000000000000002e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal 
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  50.69 
 
 
541 aa  130  3e-29  Burkholderia phymatum STM815  Bacteria  normal  normal  0.59439 
 
 
-
 
NC_010676  Bphyt_6236  multi-sensor signal transduction histidine kinase  53.45 
 
 
553 aa  129  4.0000000000000003e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.914679 
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  49.26 
 
 
200 aa  129  5.0000000000000004e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  50 
 
 
359 aa  129  8.000000000000001e-29  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  51.28 
 
 
715 aa  128  1.0000000000000001e-28  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal 
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  49.14 
 
 
440 aa  127  2.0000000000000002e-28  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  51.26 
 
 
202 aa  127  3e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_011726  PCC8801_1350  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  50.43 
 
 
715 aa  126  4.0000000000000003e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  49.58 
 
 
337 aa  126  5e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  53.45 
 
 
395 aa  125  6e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_012918  GM21_3242  response regulator receiver sensor signal transduction histidine kinase  46.46 
 
 
441 aa  124  2e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  47.41 
 
 
441 aa  122  8e-27  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  49.21 
 
 
312 aa  122  9e-27  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  47.41 
 
 
437 aa  121  9.999999999999999e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  46.38 
 
 
383 aa  121  9.999999999999999e-27  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  46.15 
 
 
395 aa  122  9.999999999999999e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  46.15 
 
 
395 aa  122  9.999999999999999e-27  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  43.08 
 
 
322 aa  121  1.9999999999999998e-26  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  48.28 
 
 
314 aa  120  1.9999999999999998e-26  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  46.22 
 
 
443 aa  119  6e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  42.31 
 
 
308 aa  119  6e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  42.31 
 
 
308 aa  119  6e-26  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  40.43 
 
 
363 aa  119  7e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  51.11 
 
 
316 aa  118  9.999999999999999e-26  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  41.3 
 
 
317 aa  118  9.999999999999999e-26  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  51.72 
 
 
363 aa  118  9.999999999999999e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  45.69 
 
 
437 aa  117  1.9999999999999998e-25  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  40.82 
 
 
353 aa  117  1.9999999999999998e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  44.19 
 
 
384 aa  117  3e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  38.22 
 
 
374 aa  117  3.9999999999999997e-25  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  38.22 
 
 
374 aa  117  3.9999999999999997e-25  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  48 
 
 
343 aa  115  1.0000000000000001e-24  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  44.71 
 
 
312 aa  115  1.0000000000000001e-24  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007798  NSE_0512  response regulator PleD  36.49 
 
 
456 aa  114  1.0000000000000001e-24  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  48.28 
 
 
365 aa  115  1.0000000000000001e-24  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  40.24 
 
 
386 aa  115  1.0000000000000001e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal 
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  37.19 
 
 
386 aa  114  2.0000000000000002e-24  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_5066  response regulator receiver modulated diguanylate cyclase  48.21 
 
 
338 aa  114  2.0000000000000002e-24  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  39.33 
 
 
361 aa  114  3e-24  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  48.84 
 
 
370 aa  113  3e-24  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  44.27 
 
 
349 aa  114  3e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  36.2 
 
 
593 aa  113  4.0000000000000004e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_2303  response regulator receiver protein  44.19 
 
 
227 aa  113  4.0000000000000004e-24  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  36.2 
 
 
593 aa  113  4.0000000000000004e-24  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  41.38 
 
 
367 aa  113  4.0000000000000004e-24  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_010524  Lcho_2589  response regulator receiver modulated metal dependent phosphohydrolase  48.85 
 
 
375 aa  113  5e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0322399 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  47.2 
 
 
377 aa  112  7.000000000000001e-24  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_010524  Lcho_2452  response regulator receiver modulated metal dependent phosphohydrolase  42.11 
 
 
377 aa  111  1.0000000000000001e-23  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00101758 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  47.2 
 
 
377 aa  112  1.0000000000000001e-23  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  40.58 
 
 
378 aa  112  1.0000000000000001e-23  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
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