More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_1419 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008025  Dgeo_1419  Crp/FNR family transcriptional regulator  100 
 
 
208 aa  407  1e-113  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.0779815 
 
 
-
 
NC_014212  Mesil_1482  transcriptional regulator, Crp/Fnr family  42.7 
 
 
196 aa  144  9e-34  Meiothermus silvanus DSM 9946  Bacteria  normal  0.053801  hitchhiker  0.0000318932 
 
 
-
 
NC_013946  Mrub_0375  Crp/Fnr family transcriptional regulator  42.39 
 
 
196 aa  138  6e-32  Meiothermus ruber DSM 1279  Bacteria  normal  0.887845  normal 
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  34.59 
 
 
202 aa  104  9e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_008025  Dgeo_1015  CRP/FNR family transcriptional regulator  34.5 
 
 
204 aa  99.4  4e-20  Deinococcus geothermalis DSM 11300  Bacteria  unclonable  0.00000000202163  unclonable  0.0000000139192 
 
 
-
 
NC_014212  Mesil_2484  transcriptional regulator, Crp/Fnr family  34.92 
 
 
202 aa  99  5e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.235796 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  27.04 
 
 
229 aa  73.2  0.000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  32.24 
 
 
254 aa  71.6  0.000000000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1692  Crp/FNR family transcriptional regulator  30.2 
 
 
244 aa  71.6  0.000000000008  Cupriavidus metallidurans CH34  Bacteria  normal  0.816346  normal 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  31.16 
 
 
267 aa  71.6  0.000000000008  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  34.22 
 
 
225 aa  70.9  0.00000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2471  transcription factor Fnr  28.43 
 
 
269 aa  69.7  0.00000000003  Methylibium petroleiphilum PM1  Bacteria  normal  0.366844  normal  0.0435693 
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  32.18 
 
 
222 aa  69.3  0.00000000004  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  27.54 
 
 
225 aa  67  0.0000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1147  cyclic nucleotide-binding: regulatory protein, Crp  27.37 
 
 
261 aa  67  0.0000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1217  cyclic nucleotide-binding: regulatory protein, Crp  27.37 
 
 
261 aa  67  0.0000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8903  transcriptional regulator, Crp/Fnr family  32.29 
 
 
224 aa  67.4  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  27.54 
 
 
225 aa  67  0.0000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012560  Avin_22000  transcriptional regulator, Crp/Fnr family  29.1 
 
 
235 aa  66.2  0.0000000003  Azotobacter vinelandii DJ  Bacteria  normal  0.457493  n/a   
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  30.77 
 
 
257 aa  65.9  0.0000000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  29.5 
 
 
230 aa  65.9  0.0000000004  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  28 
 
 
251 aa  66.2  0.0000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  27.54 
 
 
225 aa  66.2  0.0000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008312  Tery_2023  Crp/FNR family transcriptional regulator  28.02 
 
 
221 aa  65.5  0.0000000005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0496812 
 
 
-
 
NC_011884  Cyan7425_0755  transcriptional regulator, Crp/Fnr family  29.41 
 
 
223 aa  65.5  0.0000000005  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.125698 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  33.14 
 
 
243 aa  65.5  0.0000000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_007604  Synpcc7942_0127  Crp/FNR family transcriptional regulator  29.74 
 
 
222 aa  65.5  0.0000000006  Synechococcus elongatus PCC 7942  Bacteria  normal  0.867755  normal  0.325855 
 
 
-
 
NC_008817  P9515_02791  CRP family global nitrogen regulatory protein  26.67 
 
 
244 aa  65.1  0.0000000008  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.696842  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  28.93 
 
 
224 aa  64.3  0.000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  29.21 
 
 
226 aa  63.5  0.000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_007348  Reut_B4212  cyclic nucleotide-binding: regulatory protein, Crp  27.69 
 
 
303 aa  63.2  0.000000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007577  PMT9312_0248  Crp/FNR family transcriptional regulator  27.69 
 
 
244 aa  63.2  0.000000003  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_02691  CRP family global nitrogen regulatory protein  25.26 
 
 
244 aa  63.2  0.000000003  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_02681  CRP family global nitrogen regulatory protein  25.26 
 
 
244 aa  62.8  0.000000003  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.548193  n/a   
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  31.44 
 
 
225 aa  62.4  0.000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  29 
 
 
230 aa  62.8  0.000000004  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  26.77 
 
 
229 aa  62.8  0.000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  31.44 
 
 
225 aa  62.4  0.000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  26.37 
 
 
231 aa  62.4  0.000000005  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  26.37 
 
 
231 aa  62.4  0.000000005  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3283  Crp/FNR family transcriptional regulator  28.86 
 
 
223 aa  62  0.000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  24.26 
 
 
236 aa  62  0.000000006  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_014248  Aazo_1065  Crp/Fnr family transcriptional regulator  28.86 
 
 
223 aa  62  0.000000006  'Nostoc azollae' 0708  Bacteria  normal  0.547512  n/a   
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  23.76 
 
 
236 aa  61.6  0.000000008  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  29.1 
 
 
235 aa  61.6  0.000000009  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  30.77 
 
 
225 aa  61.2  0.000000009  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  29.69 
 
 
224 aa  60.8  0.00000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003082  transcriptional regulator Crp/Fnr family  30.57 
 
 
231 aa  60.8  0.00000001  Vibrio sp. Ex25  Bacteria  hitchhiker  0.00863529  n/a   
 
 
-
 
NC_007347  Reut_A2034  cyclic nucleotide-binding: regulatory protein, Crp  27.23 
 
 
232 aa  61.2  0.00000001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  24.5 
 
 
250 aa  61.2  0.00000001  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  29.06 
 
 
249 aa  60.8  0.00000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  28.7 
 
 
231 aa  60.5  0.00000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  26.24 
 
 
222 aa  60.1  0.00000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  29.31 
 
 
236 aa  60.5  0.00000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_011126  HY04AAS1_0644  transcriptional regulator, Crp/Fnr family  24.19 
 
 
243 aa  60.5  0.00000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  unclonable  0.0000000000000386152  n/a   
 
 
-
 
NC_013947  Snas_5052  transcriptional regulator, Crp/Fnr family  30.85 
 
 
228 aa  60.5  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.267336 
 
 
-
 
NC_002936  DET0299  Crp/FNR family transcriptional regulator  25.43 
 
 
247 aa  59.7  0.00000003  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1138  Crp/FNR family transcriptional regulator  27.04 
 
 
260 aa  59.7  0.00000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_8112  transcriptional regulator, Crp/Fnr family  28.02 
 
 
229 aa  59.7  0.00000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  27.32 
 
 
238 aa  59.7  0.00000003  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_1987  regulatory subunit of cAMP-dependent protein kinases-like  27.46 
 
 
236 aa  59.7  0.00000003  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  27.04 
 
 
246 aa  59.3  0.00000004  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  32.26 
 
 
242 aa  59.3  0.00000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  24.5 
 
 
250 aa  59.3  0.00000004  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_008700  Sama_1799  fumarate/nitrate reduction transcriptional regulator  25.5 
 
 
250 aa  59.3  0.00000004  Shewanella amazonensis SB2B  Bacteria  normal  0.417815  normal  0.180258 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  27.04 
 
 
229 aa  58.9  0.00000005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1332  Crp/FNR family transcriptional regulator  30.43 
 
 
238 aa  58.5  0.00000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.407818  n/a   
 
 
-
 
NC_008709  Ping_0388  cAMP-regulatory protein  24.14 
 
 
212 aa  58.5  0.00000006  Psychromonas ingrahamii 37  Bacteria  normal  0.0189183  normal 
 
 
-
 
NC_008819  NATL1_03241  CRP family global nitrogen regulatory protein  26.6 
 
 
243 aa  58.5  0.00000007  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_1612  Crp/FNR family transcriptional regulator  26.5 
 
 
243 aa  58.5  0.00000007  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2037  Crp/FNR family transcriptional regulator  26.7 
 
 
232 aa  58.2  0.00000008  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.441781 
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  24.5 
 
 
250 aa  58.2  0.00000009  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  24.5 
 
 
250 aa  58.2  0.00000009  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  24 
 
 
254 aa  57.4  0.0000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  24.62 
 
 
219 aa  57.8  0.0000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009092  Shew_1993  fumarate/nitrate reduction transcriptional regulator  24.51 
 
 
249 aa  57.8  0.0000001  Shewanella loihica PV-4  Bacteria  normal  0.238952  normal 
 
 
-
 
NC_011769  DvMF_1708  transcriptional regulator, Crp/Fnr family  25.68 
 
 
229 aa  57.8  0.0000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_4187  transcriptional regulator, Crp/Fnr family  26.11 
 
 
254 aa  57.8  0.0000001  Methylobacterium populi BJ001  Bacteria  normal  0.338954  normal 
 
 
-
 
NC_013131  Caci_2591  transcriptional regulator, Crp/Fnr family  27.13 
 
 
221 aa  57.4  0.0000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.44001  normal 
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  29.02 
 
 
228 aa  57.4  0.0000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2162  fumarate/nitrate reduction transcriptional regulator  23.88 
 
 
250 aa  57  0.0000002  Shewanella baltica OS185  Bacteria  normal  0.914647  n/a   
 
 
-
 
NC_009767  Rcas_0291  Crp/FNR family transcriptional regulator  29.24 
 
 
227 aa  57  0.0000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.277011  normal 
 
 
-
 
NC_009997  Sbal195_2212  fumarate/nitrate reduction transcriptional regulator  23.88 
 
 
250 aa  57  0.0000002  Shewanella baltica OS195  Bacteria  hitchhiker  0.00299596  normal  0.266977 
 
 
-
 
NC_007520  Tcr_1487  Crp/FNR family transcriptional regulator  25.89 
 
 
240 aa  57  0.0000002  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.1472  n/a   
 
 
-
 
NC_007650  BTH_II1244  Crp/FNR family transcriptional regulator  24.49 
 
 
261 aa  57.4  0.0000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2222  fumarate/nitrate reduction transcriptional regulator  23.88 
 
 
250 aa  57  0.0000002  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000942023  normal  0.178468 
 
 
-
 
NC_010524  Lcho_2772  Crp/FNR family transcriptional regulator  25.91 
 
 
245 aa  57  0.0000002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00275745 
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  23.88 
 
 
250 aa  57  0.0000002  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  26.8 
 
 
225 aa  57  0.0000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_009379  Pnuc_0460  CRP/FNR family transcriptional regulator  26.67 
 
 
256 aa  57.4  0.0000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  23.88 
 
 
250 aa  57  0.0000002  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  27.12 
 
 
232 aa  56.2  0.0000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_010814  Glov_0629  transcriptional regulator, Crp/Fnr family  28.43 
 
 
230 aa  56.2  0.0000003  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.0000285446  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0129  Crp/FNR family transcriptional regulator  23.98 
 
 
259 aa  56.2  0.0000003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.300797  n/a   
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  28.65 
 
 
240 aa  56.2  0.0000003  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_009078  BURPS1106A_A1554  Crp/FNR family transcriptional regulator  23.98 
 
 
259 aa  56.2  0.0000003  Burkholderia pseudomallei 1106a  Bacteria  normal  0.796955  n/a   
 
 
-
 
NC_011662  Tmz1t_1288  transcriptional regulator, Crp/Fnr family  24.62 
 
 
246 aa  56.2  0.0000003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  30.3 
 
 
230 aa  56.6  0.0000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_010623  Bphy_4433  Crp/FNR family transcriptional regulator  24.35 
 
 
224 aa  56.6  0.0000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5904  Crp/FNR family transcriptional regulator  22.56 
 
 
257 aa  56.6  0.0000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.379633  normal  0.222249 
 
 
-
 
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