Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0460 |
Symbol | |
ID | 5053530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 451156 |
End bp | 451926 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470613 |
Product | CRP/FNR family transcriptional regulator |
Protein accession | YP_001155244 |
Protein GI | 145588647 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTACA AGCCCACCGA CACCCCCACC AGCAAATGCT CAGTCTGCGT TCTTGGGCAG TTCTGTCTTC CGGTTGGCCT GAGCGCTACT GACGTCACTA AAATTGATTC TCTAGTCAAA GAGCGTGTGC ACTTGCAAAA GGGTGAGAGC CTCTATCGAC ATGGCGACCC TCTTTCATCC GTGTACAGCG TTCGTTTTGG AACCCTCAAA ACAGAGTTCT GCCTACAAGA TGGCCGTCAA CAAGTGATTG GCTTTCATCT TCCCGGTGAA ATTTTAGGTT TGGATGGTAT TGGCGATGGC CATTATCAAT CAGATGCAAT TGCTTTAGAA GAAAGCGAAG TCTGCATTAT TCGCTATGAA GCCTTTGAAG ATTTAGCCAG ACAGATTCCA GTGTTACAAA ATCAATTTCA TAAGATTATG AGTCGTGAGC TCACTCAAGA CCAACGCCAC TTACTCTCAT TAGGCACAAT GCGTGCTGAA GAGAGACTTG CTGCATTTTT ACTGAGTCTT TCACAGCGCT TAGCGGCACG GGGTTATCTC AATAATGAAT TTGATTTGCG GATGAGCCGA GTAGAGATTG GAAGCTATTT AGGTATGCAG ATTGAAACTG TGAGCCGCAT GCTTTCTCGT TTTGCAGAAT CAGGTTTGAT TCAAATTAAG CAACGACATA TCAAACTGAT TGATATGGAT GGCTTGTATG AGTTGGCTGG CGTCCCCAAC CCCGATAGGG CCACCTGTGT AAGCGCAGAG ATACCAGTAA AACAGGCTTA A
|
Protein sequence | MNYKPTDTPT SKCSVCVLGQ FCLPVGLSAT DVTKIDSLVK ERVHLQKGES LYRHGDPLSS VYSVRFGTLK TEFCLQDGRQ QVIGFHLPGE ILGLDGIGDG HYQSDAIALE ESEVCIIRYE AFEDLARQIP VLQNQFHKIM SRELTQDQRH LLSLGTMRAE ERLAAFLLSL SQRLAARGYL NNEFDLRMSR VEIGSYLGMQ IETVSRMLSR FAESGLIQIK QRHIKLIDMD GLYELAGVPN PDRATCVSAE IPVKQA
|
| |