More than 300 homologs were found in PanDaTox collection
for query gene Sala_1641 on replicon NC_008048
Organism: Sphingopyxis alaskensis RB2256



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008048  Sala_1641  methyl-accepting chemotaxis sensory transducer  100 
 
 
480 aa  983    Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0715397  normal 
 
 
-
 
NC_009511  Swit_3980  methyl-accepting chemotaxis sensory transducer  37.77 
 
 
468 aa  295  1e-78  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.330272 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  28.7 
 
 
511 aa  202  9.999999999999999e-51  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  28.85 
 
 
470 aa  201  1.9999999999999998e-50  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  28.19 
 
 
468 aa  195  2e-48  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_012856  Rpic12D_0496  methyl-accepting chemotaxis sensory transducer  26.98 
 
 
470 aa  191  2e-47  Ralstonia pickettii 12D  Bacteria  normal  normal  0.453159 
 
 
-
 
NC_010682  Rpic_0509  methyl-accepting chemotaxis sensory transducer  26.77 
 
 
470 aa  190  5.999999999999999e-47  Ralstonia pickettii 12J  Bacteria  normal  0.856427  normal  0.10181 
 
 
-
 
NC_007643  Rru_A1554  methyl-accepting chemotaxis sensory transducer  26.02 
 
 
495 aa  189  8e-47  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  29.98 
 
 
482 aa  188  2e-46  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1152  methyl-accepting chemotaxis sensory transducer  28.82 
 
 
484 aa  186  6e-46  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.26629  normal 
 
 
-
 
NC_010515  Bcenmc03_5149  methyl-accepting chemotaxis sensory transducer  25.17 
 
 
468 aa  184  3e-45  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.853292  normal 
 
 
-
 
NC_008061  Bcen_3236  methyl-accepting chemotaxis sensory transducer  25.17 
 
 
476 aa  183  6e-45  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.315544  n/a   
 
 
-
 
NC_008543  Bcen2424_5132  methyl-accepting chemotaxis sensory transducer  25.17 
 
 
468 aa  182  9.000000000000001e-45  Burkholderia cenocepacia HI2424  Bacteria  normal  0.202601  normal 
 
 
-
 
NC_009485  BBta_6912  methyl-accepting chemotaxis sensory transducer  28.7 
 
 
475 aa  181  2.9999999999999997e-44  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.18628  normal  0.2896 
 
 
-
 
NC_007517  Gmet_2939  methyl-accepting chemotaxis sensory transducer  29.25 
 
 
696 aa  168  2e-40  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000015868 
 
 
-
 
NC_008789  Hhal_0535  methyl-accepting chemotaxis sensory transducer  25.66 
 
 
487 aa  162  2e-38  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0932  methyl-accepting chemotaxis sensory transducer  30.75 
 
 
707 aa  159  1e-37  Geobacter lovleyi SZ  Bacteria  normal  0.1893  n/a   
 
 
-
 
NC_002939  GSU0582  methyl-accepting chemotaxis protein  31.82 
 
 
696 aa  157  3e-37  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1290  methyl-accepting chemotaxis sensory transducer  27.99 
 
 
522 aa  155  1e-36  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3064  methyl-accepting chemotaxis sensory transducer  27.99 
 
 
522 aa  155  1e-36  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.0000000699577 
 
 
-
 
NC_008321  Shewmr4_1155  methyl-accepting chemotaxis sensory transducer  28.54 
 
 
523 aa  155  1e-36  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1246  methyl-accepting chemotaxis sensory transducer  27.99 
 
 
522 aa  155  1e-36  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1324  methyl-accepting chemotaxis sensory transducer  27.99 
 
 
522 aa  155  2e-36  Shewanella baltica OS195  Bacteria  normal  normal  0.0159359 
 
 
-
 
NC_009483  Gura_4401  methyl-accepting chemotaxis sensory transducer  29.19 
 
 
695 aa  155  2e-36  Geobacter uraniireducens Rf4  Bacteria  normal  0.896591  n/a   
 
 
-
 
NC_008577  Shewana3_1156  methyl-accepting chemotaxis sensory transducer  27.77 
 
 
523 aa  153  7e-36  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1226  methyl-accepting chemotaxis sensory transducer  27.77 
 
 
523 aa  152  8.999999999999999e-36  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1808  methyl-accepting chemotaxis sensory transducer  25.76 
 
 
514 aa  152  1e-35  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2227  methyl-accepting chemotaxis sensory transducer  28.4 
 
 
481 aa  152  2e-35  Jannaschia sp. CCS1  Bacteria  normal  0.237535  normal 
 
 
-
 
NC_007298  Daro_0561  methyl-accepting chemotaxis sensory transducer  28.54 
 
 
505 aa  147  6e-34  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4367  methyl-accepting chemotaxis sensory transducer  30.09 
 
 
524 aa  143  6e-33  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0467  methyl-accepting chemotaxis sensory transducer  27.27 
 
 
693 aa  142  9e-33  Geobacter bemidjiensis Bem  Bacteria  normal  0.285916  n/a   
 
 
-
 
NC_009438  Sputcn32_2723  methyl-accepting chemotaxis sensory transducer  26.28 
 
 
522 aa  140  6e-32  Shewanella putrefaciens CN-32  Bacteria  normal  0.471128  n/a   
 
 
-
 
NC_008740  Maqu_2839  methyl-accepting chemotaxis sensory transducer  24.95 
 
 
546 aa  139  2e-31  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  24.79 
 
 
525 aa  137  3.0000000000000003e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  27.34 
 
 
474 aa  136  7.000000000000001e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3042  methyl-accepting chemotaxis protein  24.42 
 
 
527 aa  135  9.999999999999999e-31  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1623  methyl-accepting chemotaxis sensory transducer  25.86 
 
 
454 aa  135  9.999999999999999e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00717627 
 
 
-
 
NC_008825  Mpe_A3082  methyl-accepting chemotaxis sensory transducer  25.76 
 
 
448 aa  134  3.9999999999999996e-30  Methylibium petroleiphilum PM1  Bacteria  normal  0.802467  normal  0.530433 
 
 
-
 
NC_007492  Pfl01_3326  chemotaxis sensory transducer  29.89 
 
 
534 aa  133  6e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  25.55 
 
 
533 aa  132  9e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_012918  GM21_0484  methyl-accepting chemotaxis sensory transducer  28.41 
 
 
693 aa  132  9e-30  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000150879 
 
 
-
 
NC_007005  Psyr_3261  chemotaxis sensory transducer  26.3 
 
 
534 aa  132  1.0000000000000001e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0385  methyl-accepting chemotaxis sensory transducer  28.94 
 
 
698 aa  132  2.0000000000000002e-29  Geobacter lovleyi SZ  Bacteria  normal  0.0817491  n/a   
 
 
-
 
NC_007498  Pcar_1985  methyl-accepting chemotaxis protein (MCP)  28.53 
 
 
715 aa  130  5.0000000000000004e-29  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_55750  putative chemotaxis transducer  27.17 
 
 
538 aa  130  6e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3399  methyl-accepting chemotaxis sensory transducer  26.67 
 
 
526 aa  129  1.0000000000000001e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4857  methyl-accepting chemotaxis protein  27.17 
 
 
535 aa  127  4.0000000000000003e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4961  methyl-accepting chemotaxis protein  22.78 
 
 
527 aa  125  1e-27  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1460  methyl-accepting chemotaxis sensory transducer  24.01 
 
 
534 aa  122  9.999999999999999e-27  Marinomonas sp. MWYL1  Bacteria  normal  0.695651  normal 
 
 
-
 
NC_011662  Tmz1t_1958  methyl-accepting chemotaxis sensory transducer  27.86 
 
 
598 aa  119  9.999999999999999e-26  Thauera sp. MZ1T  Bacteria  normal  0.57626  n/a   
 
 
-
 
NC_004578  PSPTO_2475  methyl-accepting chemotaxis protein  28.5 
 
 
598 aa  118  3e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0390427  n/a   
 
 
-
 
NC_007005  Psyr_2241  histidine kinase, HAMP region: chemotaxis sensory transducer  26.97 
 
 
598 aa  117  5e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.130389  normal  0.394001 
 
 
-
 
NC_007298  Daro_3097  methyl-accepting chemotaxis sensory transducer  25.76 
 
 
602 aa  116  7.999999999999999e-25  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0041  methyl-accepting chemotaxis sensory transducer  26.05 
 
 
573 aa  116  1.0000000000000001e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0009  methyl-accepting chemotaxis sensory transducer  27.41 
 
 
511 aa  114  4.0000000000000004e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_4172  methyl-accepting chemotaxis sensory transducer  31.94 
 
 
584 aa  112  1.0000000000000001e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6911  methyl-accepting chemotaxis sensory transducer  35.06 
 
 
584 aa  110  4.0000000000000004e-23  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.900499  normal  0.411338 
 
 
-
 
NC_007778  RPB_4274  methyl-accepting chemotaxis sensory transducer  30.37 
 
 
583 aa  110  4.0000000000000004e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1286  methyl-accepting chemotaxis sensory transducer  32.56 
 
 
583 aa  109  1e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4808  methyl-accepting chemotaxis sensory transducer  35.26 
 
 
584 aa  103  5e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_1837  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
578 aa  100  4e-20  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00718884 
 
 
-
 
NC_011146  Gbem_2381  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
578 aa  98.6  2e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0534  methyl-accepting chemotaxis sensory transducer  25.79 
 
 
439 aa  98.6  2e-19  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_3145  methyl-accepting chemotaxis sensory transducer  30.86 
 
 
832 aa  93.6  7e-18  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.390275  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  33.94 
 
 
688 aa  92.4  2e-17  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_007519  Dde_3261  methyl-accepting chemotaxis sensory transducer  32.54 
 
 
613 aa  92  2e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0071  methyl-accepting chemotaxis sensory transducer  23.79 
 
 
525 aa  92  2e-17  Rhodothermus marinus DSM 4252  Bacteria  normal  0.603344  n/a   
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
688 aa  91.3  3e-17  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_009654  Mmwyl1_2432  methyl-accepting chemotaxis sensory transducer  32.47 
 
 
555 aa  91.7  3e-17  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0013651  normal  0.119091 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  34.13 
 
 
738 aa  90.9  5e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_008463  PA14_30820  putative methyl-accepting chemotaxis transducer  29.2 
 
 
535 aa  90.9  5e-17  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0142633  hitchhiker  0.0000000000042709 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  33.48 
 
 
688 aa  90.5  6e-17  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_013202  Hmuk_2424  methyl-accepting chemotaxis sensory transducer  31.63 
 
 
809 aa  90.1  8e-17  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.052407 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  36.75 
 
 
688 aa  89.4  1e-16  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  39.04 
 
 
672 aa  88.6  2e-16  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  29.92 
 
 
578 aa  88.6  2e-16  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  30.24 
 
 
658 aa  89  2e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5564  putative chemotaxis transducer  32.24 
 
 
657 aa  88.6  2e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  35.29 
 
 
645 aa  88.2  3e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1372  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.84 
 
 
811 aa  88.2  3e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008463  PA14_64060  putative chemotaxis transducer  32.24 
 
 
657 aa  88.2  3e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3112  chemotaxis sensory transducer  30.59 
 
 
541 aa  87.8  4e-16  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2635  putative methyl-accepting chemotaxis sensory transducer  31.8 
 
 
706 aa  87.8  4e-16  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.993869 
 
 
-
 
NC_009718  Fnod_1435  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
678 aa  87.4  6e-16  Fervidobacterium nodosum Rt17-B1  Bacteria  decreased coverage  0.00000167242  n/a   
 
 
-
 
NC_010511  M446_6117  methyl-accepting chemotaxis sensory transducer  29.8 
 
 
713 aa  87  6e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.140639  normal 
 
 
-
 
NC_012029  Hlac_1029  methyl-accepting chemotaxis sensory transducer  32.16 
 
 
819 aa  87.4  6e-16  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.558162 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  35.43 
 
 
714 aa  86.7  8e-16  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  36.32 
 
 
515 aa  86.7  9e-16  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3577  methyl-accepting chemotaxis protein  28.63 
 
 
542 aa  86.7  9e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000971  methyl-accepting chemotaxis protein  30.29 
 
 
553 aa  86.7  9e-16  Vibrio sp. Ex25  Bacteria  normal  0.370017  n/a   
 
 
-
 
NC_007912  Sde_1108  putative methyl-accepting chemotaxis sensory transducer  36.18 
 
 
539 aa  86.7  9e-16  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1795  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.91 
 
 
658 aa  86.7  9e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_3925  methyl-accepting chemotaxis protein  34.48 
 
 
674 aa  85.9  0.000000000000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.903723  n/a   
 
 
-
 
NC_011769  DvMF_2663  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.72 
 
 
527 aa  85.9  0.000000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  31.5 
 
 
658 aa  85.9  0.000000000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2644  chemotaxis transducer  30.77 
 
 
280 aa  85.9  0.000000000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  0.120039  n/a   
 
 
-
 
NC_013173  Dbac_0724  methyl-accepting chemotaxis sensory transducer  31.58 
 
 
558 aa  85.9  0.000000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0703  methyl-accepting chemotaxis sensory transducer  32.49 
 
 
805 aa  86.7  0.000000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_1087  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
529 aa  86.3  0.000000000000001  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.766916  normal 
 
 
-
 
NC_010002  Daci_5361  methyl-accepting chemotaxis sensory transducer  31.49 
 
 
508 aa  86.7  0.000000000000001  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
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