| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3980 |
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| Symbol | |
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| ID | 5197935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4369319 |
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| End bp | 4370725 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583536 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001264463 |
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| Protein GI | 148556881 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.330272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATGG CTCCGATAGG CAAGGACGCG CTCAAGCTCG AAACCGCGAT CGGCGAGATC
GCGCGCGGCT GCGGACGCTT CGCCATCGAA TGCAGCGACG TCGGCGGCAA CGTCGTCGAG
GTCGGCGACA AGATCGTCGC CCAGGCCGAC CTGCTCGACC AGCTTCGCGA GGCGGCGACC
GGGCTGCGCG CCGAGCAGGA GCAGGTCACC GAGGCCGCCG CCGAAGCGCG CGAATTCGCC
ACCCAGGCGC GCGGCCATCT CGAAGCGTCC AAGCCCGTCG TCGACGGCGC GATCGAAACC
TTCGCCGGCC TCACCGAACT GGTGCTGCGC CTCGGCCAGC GGATGGACAA TCTGGAGGAG
GCGCTGCGCC AGGTGCGGAC CGTCGCCCAG TCGATCGACA GCATCGGCCG GCAGACCAAC
CTGCTCGCGC TCAACGCCAC GCTGGAGGCC GCCCGCGCCG GCGAGGCGGG GCGCGGCTTC
GCGGTCGTCG CGGGCGAGGT GAAGAAGCTC GCGTCGGACA CCCGCAGCGC GACCGAGCGG
ATCGCCCGCA CGATCGAGCG GCTCAACGAG GAGGCGCGCG GCATCGGCGG CGAGATCGAG
GCCGGCGTCG CGAACGGCGG CGAGGCGCGC GCGAAGACCG CCGAGCTCGC CCATGTGCTG
GGCGAGACGC TGGCCTTCGT CGACGCGCTC GACACCCGGT CGGGCAACAT CGCCGAGGGG
TCGCTCGCGA TCCGCCGCAA CGTCCAGGAT TTCGAACTGG GGCTGACCAG CCTGTCGAAC
GAGGCCCAGG CCAACAGCCA GGCGCTGAGC GAGGCCCGCG ACCGGCTGGG CAATCTGGAG
CGCATCTCCA ACGGCCTGCT CAACCTGGTG TCGAACGCCG GGGTCCCCAC CGCCGACACG
CCGTTCATCG AGACCGCGCG GCGGCTGATG CTCGACATAA GGCGGATCAC CGAGGCGGCG
ATCGACGAAG GCCGACTGGC GATCGACGAC GTGTTCGACC GCGATTATGT GCCCGTCGCA
GGCAGCGACC CCGAGCAGTT CATGACCCGC TTCGTCGCCT TCGCCGACGC CCATGTCCGG
CCGCTGCTCG ACCGCATCGT CGAGGGCGAC AGCCGCGTCC TCGCCACCGC GATCGTCGAC
GCCAACGGCT TCCTGCCGAC CCATATCGGC AGCCGCTCGC TGCCACAGGG CCCCGATCCG
CTGTGGAACG CCGAGCATTG CCGCAACCGC CGCTTCTTCA TGGACGAGCA GACCGCGCTC
AACCTGAAGA GCGACGCGCC CTTCATCGTC GAGACCTATC GCCAGGACCT GGGCGGCGGA
CGCTATCGGC CGGTCAAGAG CATCTGCCTG CCCCTCCATG TGAAGGGCCG CCGCTGGGGC
AATCTGGAAT TCGCGTATTT GGATTAG
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| Protein sequence | MEMAPIGKDA LKLETAIGEI ARGCGRFAIE CSDVGGNVVE VGDKIVAQAD LLDQLREAAT
GLRAEQEQVT EAAAEAREFA TQARGHLEAS KPVVDGAIET FAGLTELVLR LGQRMDNLEE
ALRQVRTVAQ SIDSIGRQTN LLALNATLEA ARAGEAGRGF AVVAGEVKKL ASDTRSATER
IARTIERLNE EARGIGGEIE AGVANGGEAR AKTAELAHVL GETLAFVDAL DTRSGNIAEG
SLAIRRNVQD FELGLTSLSN EAQANSQALS EARDRLGNLE RISNGLLNLV SNAGVPTADT
PFIETARRLM LDIRRITEAA IDEGRLAIDD VFDRDYVPVA GSDPEQFMTR FVAFADAHVR
PLLDRIVEGD SRVLATAIVD ANGFLPTHIG SRSLPQGPDP LWNAEHCRNR RFFMDEQTAL
NLKSDAPFIV ETYRQDLGGG RYRPVKSICL PLHVKGRRWG NLEFAYLD
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