Gene Hmuk_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1087 
Symbol 
ID8410606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1035233 
End bp1036822 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content69% 
IMG OID645019423 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003176921 
Protein GI257387148 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.766916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCAC GGACAGTCAC GTGGCTCGCC TCGCAGTACA GCCGCCGCAT CGGCACGGCG 
CTGGCGATCA CGTTGGGAGT GACGGTCGGT TTCGGTGCGG TCTTTGCCGC CCACGTCGCC
ACTTCGCCGG AGGCCGGACT CGCCGGGCTC GCGGGGACGG TCTTCGTCGT CACGCTCAAC
CTCGGCCTGC TGGGAATCGT GTTGGCCGGC AACGTCGCGG TCGAGCTCAG ACAGCTCACC
GACGCGGCCG CCGCCATCGA GGACGGCGAC CTCGACGCCA CTCCCGAGGT CGATCGGGCC
GACGAGTTCG GCCGGCTCGC CGACGCGTTC GACAGCATGC GCGACTCGCT CACGTCGGCC
TTCGAAGAGT CGGAGGCCTC TCGCAAAGAG GCCGAACAGG CGAAGTCGGA GGCCGAAGCG
GCCCGCGCCG AGGCCGAGGA ATTCAACGAT CGACTGGTCG ATCAGGCCGA GACGATCGGC
GACGCGATGG CGGCCGCCGC CGACGGCGAC TTCACCCACC GCCTGACGGC CGACAGCGAG
GTCGACGCGA TCGAACGGAT CGCCGACGCC TACGAGTCGA TGACCGTCGA CCTCTCGGAT
ACTGTCGGCG AGATTCGGGC CTTCGCGACG ACGGTCGAAC AGACAAGCGG GGCCGTCGCC
GAGGACGCCG CCGAGGTCGA GCGCCTCAAC GAGTCGCTGG CGACCGACAT CCGCGAACTC
GCCAGTGACG TGTCCGGACA GGCCGAACGC CTCCAGAGCG CGGTCGCCGA GACGAACGAC
CTCTCGGCGA CGATCGAGGA AGTCGCTTCG ACGACCGACG AGGTCGCGGG GCGGGCGACC
GAAGCCGCCG AGGTCGGCGC GACCGGCGCA GAGCGCACCG AAGAGGCAGT CGAGACGATC
GAACACGTCG CCGACGCCGT CGACGAACTC GACCGGCTCG TCGCCGCTCT CGACGACCGG
ATGGACGAGG TCGCGGAGAC GACGGGACTC ATCGACGAGA TCGCCCAGCA GACCGACATG
CTCGCGCTCA ACGCCAACAT CGAGGCCTCT CACGCCGGGA GCGGTGGCGA CGGGTTCGCC
GTCGTCGCCG ACGAAGTGAA GGGGCTGGCC GAGCAGACCC AGGACGCCAT CGACGAGATC
GAGTCGATCG TCGACGGTGC CCGCGACGAC GTGGACGGCG TGACCGAGGA GATGGCGCTG
ACGCGCCGCC GGATCGACGA CGGGGTCGAG ACGGTGACCG AAGCCGGAGA GACGCTGGGC
ACGCTGACCG AGACCGTCGA CGACGTGGAC GACGCGATGG CGGAGATCGC CCGCGCGACC
GACGACGGTG CGGCCGCCAC CGAGGAGGTC TCGGCAGCGC TCGACCAGGT CGCCGAGTCC
GCCCAGCAGG TGGCGACTCG CTCGAACGAG CTGGCCGACA CGGCCGAGCA GACGGCGTCG
ACGATGCGTG GCGTTCGCGA GCGCGCCGAC GACCTGAACG ACCAGACGGC CGACCTGATG
GCGCTGCTGG ATTCGTTCGA GACCAGAGAC ACGGACCACA CCGGAGCAGT CCAGACCGCG
AGCGCAACGG CGGGTGACGA CGATGATTGA
 
Protein sequence
MQSRTVTWLA SQYSRRIGTA LAITLGVTVG FGAVFAAHVA TSPEAGLAGL AGTVFVVTLN 
LGLLGIVLAG NVAVELRQLT DAAAAIEDGD LDATPEVDRA DEFGRLADAF DSMRDSLTSA
FEESEASRKE AEQAKSEAEA ARAEAEEFND RLVDQAETIG DAMAAAADGD FTHRLTADSE
VDAIERIADA YESMTVDLSD TVGEIRAFAT TVEQTSGAVA EDAAEVERLN ESLATDIREL
ASDVSGQAER LQSAVAETND LSATIEEVAS TTDEVAGRAT EAAEVGATGA ERTEEAVETI
EHVADAVDEL DRLVAALDDR MDEVAETTGL IDEIAQQTDM LALNANIEAS HAGSGGDGFA
VVADEVKGLA EQTQDAIDEI ESIVDGARDD VDGVTEEMAL TRRRIDDGVE TVTEAGETLG
TLTETVDDVD DAMAEIARAT DDGAAATEEV SAALDQVAES AQQVATRSNE LADTAEQTAS
TMRGVRERAD DLNDQTADLM ALLDSFETRD TDHTGAVQTA SATAGDDDD