More than 300 homologs were found in PanDaTox collection
for query gene Ppro_0376 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_0376  two component LuxR family transcriptional regulator  100 
 
 
240 aa  486  1e-136  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  37.5 
 
 
217 aa  148  8e-35  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  38.46 
 
 
218 aa  139  4.999999999999999e-32  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  41.09 
 
 
218 aa  136  4e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  39.22 
 
 
213 aa  134  9.999999999999999e-31  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  34.3 
 
 
218 aa  133  1.9999999999999998e-30  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  36.63 
 
 
213 aa  134  1.9999999999999998e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  33.33 
 
 
218 aa  132  6.999999999999999e-30  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  33.33 
 
 
218 aa  132  6.999999999999999e-30  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  37.56 
 
 
228 aa  127  2.0000000000000002e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  38.94 
 
 
215 aa  127  2.0000000000000002e-28  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  33.5 
 
 
214 aa  126  3e-28  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_012669  Bcav_0404  two component transcriptional regulator, LuxR family  39.44 
 
 
218 aa  125  5e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0987348  normal 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.5 
 
 
215 aa  125  6e-28  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  36.41 
 
 
219 aa  124  1e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0121621 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  33.66 
 
 
215 aa  124  1e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  35 
 
 
223 aa  124  2e-27  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  31.1 
 
 
215 aa  123  2e-27  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  34.62 
 
 
218 aa  124  2e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  33.66 
 
 
224 aa  124  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  34.48 
 
 
232 aa  123  3e-27  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  35.41 
 
 
244 aa  123  3e-27  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  37.91 
 
 
228 aa  123  3e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  36.14 
 
 
228 aa  122  7e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.33 
 
 
212 aa  121  8e-27  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  34.47 
 
 
241 aa  120  9.999999999999999e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.858367 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  33.99 
 
 
232 aa  121  9.999999999999999e-27  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  33.99 
 
 
232 aa  120  9.999999999999999e-27  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  35.24 
 
 
225 aa  120  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  33.49 
 
 
221 aa  120  1.9999999999999998e-26  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  34.58 
 
 
234 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  39.81 
 
 
225 aa  120  1.9999999999999998e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  34.6 
 
 
216 aa  119  3e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  37.86 
 
 
223 aa  120  3e-26  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  38.24 
 
 
220 aa  120  3e-26  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  33.5 
 
 
213 aa  119  3.9999999999999996e-26  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  37.44 
 
 
221 aa  119  3.9999999999999996e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  35.47 
 
 
214 aa  119  4.9999999999999996e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  36.23 
 
 
215 aa  119  4.9999999999999996e-26  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  34.27 
 
 
222 aa  119  4.9999999999999996e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  36.23 
 
 
234 aa  118  6e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  34.7 
 
 
228 aa  118  7e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  34.27 
 
 
223 aa  118  7e-26  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  34.65 
 
 
217 aa  118  9.999999999999999e-26  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  30.62 
 
 
219 aa  117  9.999999999999999e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  35.27 
 
 
215 aa  116  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  32.55 
 
 
222 aa  117  1.9999999999999998e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  36.11 
 
 
229 aa  117  1.9999999999999998e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  35.12 
 
 
214 aa  116  1.9999999999999998e-25  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0163  two component transcriptional regulator, LuxR family  37.44 
 
 
213 aa  116  3e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.107009  normal 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  35.12 
 
 
214 aa  115  5e-25  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  32.67 
 
 
210 aa  115  5e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  37.86 
 
 
231 aa  115  5e-25  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  37.81 
 
 
225 aa  115  6e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  33.49 
 
 
206 aa  115  6e-25  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  32.67 
 
 
210 aa  115  7.999999999999999e-25  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  32.77 
 
 
253 aa  114  1.0000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  34.47 
 
 
221 aa  114  1.0000000000000001e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  35.89 
 
 
218 aa  114  1.0000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  33.66 
 
 
208 aa  114  1.0000000000000001e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0637899 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  31.86 
 
 
224 aa  114  1.0000000000000001e-24  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  32.67 
 
 
210 aa  114  1.0000000000000001e-24  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  29.56 
 
 
212 aa  114  1.0000000000000001e-24  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  29.81 
 
 
218 aa  113  2.0000000000000002e-24  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  36.23 
 
 
215 aa  114  2.0000000000000002e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.06 
 
 
239 aa  113  2.0000000000000002e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  33.81 
 
 
218 aa  114  2.0000000000000002e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  36.41 
 
 
217 aa  113  3e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  35.38 
 
 
211 aa  112  3e-24  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  30.88 
 
 
224 aa  113  3e-24  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  36.97 
 
 
247 aa  112  5e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  35.15 
 
 
217 aa  112  5e-24  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  32.68 
 
 
219 aa  112  5e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  34.78 
 
 
220 aa  112  5e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  33.77 
 
 
237 aa  112  5e-24  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  32.2 
 
 
232 aa  112  5e-24  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  31.37 
 
 
232 aa  112  5e-24  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  31.53 
 
 
224 aa  112  6e-24  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  31.53 
 
 
224 aa  112  6e-24  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  35.32 
 
 
220 aa  112  6e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  37.02 
 
 
224 aa  112  7.000000000000001e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  35.07 
 
 
217 aa  112  7.000000000000001e-24  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  36.41 
 
 
221 aa  112  7.000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.685529 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  37.5 
 
 
226 aa  112  7.000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  30 
 
 
222 aa  112  7.000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  35.47 
 
 
230 aa  111  8.000000000000001e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  34.47 
 
 
217 aa  111  9e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.525358 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  32.2 
 
 
223 aa  111  9e-24  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  34.5 
 
 
217 aa  111  1.0000000000000001e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  32.71 
 
 
242 aa  111  1.0000000000000001e-23  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  31.19 
 
 
210 aa  111  1.0000000000000001e-23  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_012792  Vapar_5556  two component transcriptional regulator, LuxR family  31 
 
 
255 aa  111  1.0000000000000001e-23  Variovorax paradoxus S110  Bacteria  normal  0.853701  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  33.82 
 
 
241 aa  111  1.0000000000000001e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_008255  CHU_1317  response regulator  31.1 
 
 
220 aa  111  1.0000000000000001e-23  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_010644  Emin_1197  two component LuxR family transcriptional regulator  31.19 
 
 
225 aa  110  1.0000000000000001e-23  Elusimicrobium minutum Pei191  Bacteria  normal  normal  0.0485473 
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  30.43 
 
 
217 aa  111  1.0000000000000001e-23  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.43 
 
 
226 aa  111  1.0000000000000001e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  35.78 
 
 
218 aa  111  1.0000000000000001e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  30.43 
 
 
217 aa  111  1.0000000000000001e-23  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  30.69 
 
 
210 aa  110  2.0000000000000002e-23  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
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