Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0376 |
Symbol | |
ID | 4573075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 388015 |
End bp | 388737 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639754415 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_900068 |
Protein GI | 118578818 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTGCA GCCACAGCGC CCCCGTCCCG AAACCGGAAA CAAGGCATGG GGACGCACTG AAGGGGATTA CCGTGAAAGA CAATGACACT ACTGGAATTC TGGTCGCAAG CGACCAGATC CTGCTGCGCG CCGGATTGCG CGAGTTGCTG CACACAGAGC CGAACCTTGA TGTCGTGGGA GAAGCGCTGG ACGAGAATGA AACGATCTAT CTAACGGGTC GACTTGAGCC GGACATCGTT CTAATGGTTG TACTGAACAG GAGAGAGGCC AGCATCGGGG TCACCAAACG ACTGAAAGCC CAGCATCCCG ACATCGGCGT TATCCTGGTA ACCAGCTGCG AGGATACCAC ATTCGCCCGG GATATCATCC GGGCCGGCGC CTCCGGCTAT CTCCCCACCC GGGCGGCGCA ATCGGAACTG ATCAACGCCA TTCACGCCAT CAGGCGCGGG GACCTCTACA TCCACCCTTC CATGACCCGT TGCCTCCTGT ACGGCCAGAC ATCTCCGGCC GTGGCCAGGG TCCCTCCCCG GAAGCCGCTG ACACGCAGGG AAGCAGAGAT ACTGGGCTAC ATCGCCCAGG GGCATACCAA TCGCCAGATC GCCGAGCTTC TCTTCGTCAG CGTGCGTACC GTCGAGAGTC ACCGGGCCAG ACTGCAGGGG AAACTGAACG CCCACTGCCG CATGGATCTG GTACGGCACG CGGCGAACCT GGACATCAGG TAG
|
Protein sequence | MLCSHSAPVP KPETRHGDAL KGITVKDNDT TGILVASDQI LLRAGLRELL HTEPNLDVVG EALDENETIY LTGRLEPDIV LMVVLNRREA SIGVTKRLKA QHPDIGVILV TSCEDTTFAR DIIRAGASGY LPTRAAQSEL INAIHAIRRG DLYIHPSMTR CLLYGQTSPA VARVPPRKPL TRREAEILGY IAQGHTNRQI AELLFVSVRT VESHRARLQG KLNAHCRMDL VRHAANLDIR
|
| |