More than 300 homologs were found in PanDaTox collection
for query gene Oant_4644 on replicon NC_009671
Organism: Ochrobactrum anthropi ATCC 49188



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009671  Oant_4644  CRP/FNR family transcriptional regulator  100 
 
 
232 aa  475  1e-133  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.739127  n/a   
 
 
-
 
NC_004310  BR0654  Crp/FNR family transcriptional regulator  41.35 
 
 
248 aa  160  2e-38  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  42.35 
 
 
249 aa  158  6e-38  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  40.87 
 
 
251 aa  156  2e-37  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  33.33 
 
 
238 aa  100  2e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  33.33 
 
 
238 aa  100  2e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  34.97 
 
 
250 aa  99.8  4e-20  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.395788 
 
 
-
 
NC_011757  Mchl_1557  transcriptional regulator, Crp/Fnr family  34.97 
 
 
250 aa  99.4  4e-20  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00717235  normal 
 
 
-
 
NC_010725  Mpop_1302  transcriptional regulator, Crp/Fnr family  34.97 
 
 
254 aa  99.4  4e-20  Methylobacterium populi BJ001  Bacteria  normal  0.0109091  normal 
 
 
-
 
NC_010338  Caul_0629  transcriptional regulator FixK  31.61 
 
 
215 aa  97.8  1e-19  Caulobacter sp. K31  Bacteria  normal  0.595222  normal  0.236212 
 
 
-
 
NC_009621  Smed_6270  transcriptional regulator FixK  33.33 
 
 
211 aa  97.4  2e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.967473  normal  0.128199 
 
 
-
 
NC_011894  Mnod_5386  transcriptional regulator, Crp/Fnr family  30 
 
 
230 aa  96.7  3e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.662421  n/a   
 
 
-
 
NC_007778  RPB_1361  transcriptional regulator FixK  28.97 
 
 
229 aa  96.3  4e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0646149  normal 
 
 
-
 
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  31.63 
 
 
310 aa  96.3  4e-19  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_0870  transcriptional regulator FixK  30.89 
 
 
227 aa  95.9  4e-19  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  32.26 
 
 
222 aa  95.9  4e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5746  Crp/FNR family transcriptional regulator  30.73 
 
 
237 aa  95.9  4e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.765257  normal 
 
 
-
 
NC_007406  Nwi_1036  transcriptional regulator FixK  29.28 
 
 
231 aa  95.9  5e-19  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1752  transcriptional regulator, Crp/Fnr family  35.12 
 
 
250 aa  94  2e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.103124 
 
 
-
 
NC_007925  RPC_4055  transcriptional regulator FixK  32.45 
 
 
229 aa  93.6  2e-18  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1340  transcriptional regulator FixK  28.43 
 
 
229 aa  94.4  2e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.324269  normal 
 
 
-
 
NC_010172  Mext_3505  regulatory protein Crp  32.91 
 
 
229 aa  93.2  3e-18  Methylobacterium extorquens PA1  Bacteria  normal  0.021842  normal 
 
 
-
 
NC_011757  Mchl_3812  transcriptional regulator, Crp/Fnr family  32.91 
 
 
229 aa  93.2  3e-18  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4729  transcriptional regulator FixK  31.79 
 
 
230 aa  92.8  4e-18  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  32.45 
 
 
262 aa  92.4  5e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  26.5 
 
 
231 aa  92.4  5e-18  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  32.29 
 
 
245 aa  91.7  8e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal 
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  31.41 
 
 
253 aa  91.7  1e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_007925  RPC_4039  Crp/FNR family transcriptional regulator  37.97 
 
 
239 aa  91.7  1e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.70749  normal 
 
 
-
 
NC_010338  Caul_2457  Crp/FNR family transcriptional regulator  31.18 
 
 
204 aa  91.3  1e-17  Caulobacter sp. K31  Bacteria  normal  0.325923  normal  0.600278 
 
 
-
 
NC_010725  Mpop_3889  transcriptional regulator, Crp/Fnr family  33.77 
 
 
229 aa  90.1  3e-17  Methylobacterium populi BJ001  Bacteria  normal  normal  0.128439 
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  35.58 
 
 
239 aa  90.1  3e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1357  Crp/Fnr family transcriptional regulator  35.48 
 
 
239 aa  89.4  4e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2786  transcriptional regulator FixK  30.46 
 
 
229 aa  89  5e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0460697  normal  0.11454 
 
 
-
 
NC_010511  M446_6107  Crp/FNR family transcriptional regulator  31.65 
 
 
227 aa  89  6e-17  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0266042 
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  36.54 
 
 
239 aa  89  6e-17  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_011365  Gdia_1984  transcriptional regulator, Crp/Fnr family  30.6 
 
 
250 aa  88.6  7e-17  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.312779  normal 
 
 
-
 
NC_010511  M446_6927  Crp/FNR family transcriptional regulator  30 
 
 
227 aa  88.2  1e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.422372 
 
 
-
 
NC_010505  Mrad2831_3277  Crp/FNR family transcriptional regulator  30 
 
 
226 aa  87.8  1e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0408  Crp/FNR family transcriptional regulator  31.79 
 
 
230 aa  87  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2975  Crp/FNR family transcriptional regulator  32.45 
 
 
220 aa  87  2e-16  Caulobacter sp. K31  Bacteria  normal  0.169439  normal  0.307783 
 
 
-
 
NC_007960  Nham_4375  Crp/FNR family transcriptional regulator  27.27 
 
 
268 aa  87.4  2e-16  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4871  transcriptional regulator, Crp/Fnr family  31.87 
 
 
228 aa  87.4  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3610  hypothetical protein  28.25 
 
 
231 aa  86.7  3e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0576  CRP/FNR family transcriptional regulator  30.27 
 
 
235 aa  83.6  0.000000000000003  Acidiphilium cryptum JF-5  Bacteria  normal  0.670039  n/a   
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  31.54 
 
 
246 aa  83.6  0.000000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3266  cyclic nucleotide-binding  31.13 
 
 
220 aa  83.2  0.000000000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  decreased coverage  0.00116153 
 
 
-
 
NC_009621  Smed_5184  transcriptional regulator FixK  28.98 
 
 
211 aa  83.2  0.000000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.639909 
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  27.86 
 
 
230 aa  82.8  0.000000000000004  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_009656  PSPA7_3788  transcriptional regulator Anr  31.76 
 
 
244 aa  82.8  0.000000000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_008463  PA14_44490  transcriptional regulator Anr  31.76 
 
 
244 aa  82.8  0.000000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.793348 
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  29.9 
 
 
242 aa  82.4  0.000000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_011989  Avi_2026  transcriptional activator Crp family  28.65 
 
 
241 aa  81.6  0.000000000000009  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0212  putative transcriptional regulator, Crp/Fnr family  26.84 
 
 
254 aa  81.6  0.000000000000009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_4265  transcriptional regulator Anr  29.7 
 
 
244 aa  81.3  0.00000000000001  Pseudomonas putida KT2440  Bacteria  normal  0.880812  normal 
 
 
-
 
NC_010501  PputW619_3583  Crp/FNR family transcriptional regulator  29.7 
 
 
244 aa  81.3  0.00000000000001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_1603  CRP/FNR family transcriptional regulator  29.7 
 
 
244 aa  81.3  0.00000000000001  Pseudomonas putida F1  Bacteria  normal  normal  0.138297 
 
 
-
 
NC_010322  PputGB1_3830  Crp/FNR family transcriptional regulator  29.7 
 
 
244 aa  81.3  0.00000000000001  Pseudomonas putida GB-1  Bacteria  normal  normal  0.525453 
 
 
-
 
NC_013889  TK90_0787  transcriptional regulator, Crp/Fnr family  30.16 
 
 
243 aa  80.9  0.00000000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6164  transcriptional regulator, Crp/Fnr family  28.04 
 
 
247 aa  80.1  0.00000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.257657  n/a   
 
 
-
 
NC_009475  BBta_p0192  CRP family transcriptional regulator  30.41 
 
 
230 aa  80.1  0.00000000000003  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal 
 
 
-
 
NC_007005  Psyr_3425  cyclic nucleotide-binding: regulatory protein, Crp  29.94 
 
 
244 aa  79.7  0.00000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0533041 
 
 
-
 
NC_010531  Pnec_1356  transcriptional regulator, Crp/Fnr family  26.17 
 
 
256 aa  79.7  0.00000000000004  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0588975 
 
 
-
 
NC_009720  Xaut_1746  CRP/FNR family transcriptional regulator  29.78 
 
 
236 aa  79.3  0.00000000000005  Xanthobacter autotrophicus Py2  Bacteria  normal  0.753218  normal  0.546792 
 
 
-
 
NC_007964  Nham_1258  Crp/FNR family transcriptional regulator  27.83 
 
 
241 aa  79.3  0.00000000000005  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2615  CRP/FNR family transcriptional regulator  27.51 
 
 
244 aa  79  0.00000000000006  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00240538  normal  0.855877 
 
 
-
 
NC_011989  Avi_1273  cAMP-binding protein  27.12 
 
 
243 aa  79  0.00000000000007  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009467  Acry_3214  CRP/FNR family transcriptional regulator  27.14 
 
 
230 aa  79  0.00000000000007  Acidiphilium cryptum JF-5  Bacteria  normal  0.939046  n/a   
 
 
-
 
NC_007951  Bxe_A3927  Crp/FNR family transcriptional regulator  24.87 
 
 
242 aa  78.6  0.00000000000008  Burkholderia xenovorans LB400  Bacteria  normal  0.729399  hitchhiker  0.00211875 
 
 
-
 
NC_012560  Avin_19910  Fnr-like negative transcriptional regulator of CydAB  27.14 
 
 
244 aa  78.6  0.00000000000008  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1288  transcriptional regulator, Crp/Fnr family  26.82 
 
 
246 aa  78.6  0.00000000000009  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0460  CRP/FNR family transcriptional regulator  28.42 
 
 
256 aa  78.6  0.00000000000009  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1991  transcriptional activator Anr  28.74 
 
 
244 aa  78.2  0.0000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.695719  n/a   
 
 
-
 
NC_007406  Nwi_2061  Crp family transcriptional regulator  27.7 
 
 
241 aa  78.2  0.0000000000001  Nitrobacter winogradskyi Nb-255  Bacteria  hitchhiker  0.00300081  normal 
 
 
-
 
NC_007298  Daro_1047  cyclic nucleotide-binding: regulatory protein, Crp  26.7 
 
 
247 aa  77  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  28.42 
 
 
242 aa  77.4  0.0000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  29.73 
 
 
242 aa  76.6  0.0000000000003  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2699  Crp/FNR family transcriptional regulator  28.64 
 
 
232 aa  75.9  0.0000000000005  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.276502  n/a   
 
 
-
 
NC_007492  Pfl01_1811  Crp/FNR family transcriptional regulator  27.54 
 
 
244 aa  75.5  0.0000000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0606  Crp/FNR family transcriptional regulator  27.64 
 
 
267 aa  75.5  0.0000000000006  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.149995 
 
 
-
 
NC_008254  Meso_2220  transcriptional regulator FixK  30.95 
 
 
224 aa  75.5  0.0000000000007  Chelativorans sp. BNC1  Bacteria  normal  0.552775  n/a   
 
 
-
 
NC_011666  Msil_1823  transcriptional regulator, Crp/Fnr family  30.34 
 
 
234 aa  75.1  0.000000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0333657 
 
 
-
 
NC_008781  Pnap_3775  CRP/FNR family transcriptional regulator  26.22 
 
 
265 aa  73.6  0.000000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4272  transcriptional regulator, Crp/Fnr family  27.64 
 
 
218 aa  74.3  0.000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.71016  normal  0.563993 
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  30 
 
 
253 aa  73.9  0.000000000002  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_007908  Rfer_1937  Crp/FNR family transcriptional regulator  25.57 
 
 
223 aa  73.9  0.000000000002  Rhodoferax ferrireducens T118  Bacteria  normal  0.155753  n/a   
 
 
-
 
NC_012856  Rpic12D_1204  transcriptional regulator, Crp/Fnr family  27.18 
 
 
242 aa  73.2  0.000000000003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2158  Crp/FNR family transcriptional regulator  27.59 
 
 
208 aa  73.2  0.000000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.198273  normal  0.103025 
 
 
-
 
NC_010682  Rpic_1111  transcriptional regulator, Crp/Fnr family  27.18 
 
 
242 aa  73.2  0.000000000003  Ralstonia pickettii 12J  Bacteria  normal  0.700786  normal  0.531022 
 
 
-
 
CP001637  EcDH1_2311  transcriptional regulator, Crp/Fnr family  26.53 
 
 
250 aa  72.8  0.000000000004  Escherichia coli DH1  Bacteria  normal  0.144598  n/a   
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  26.53 
 
 
250 aa  72.8  0.000000000004  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2291  fumarate/nitrate reduction transcriptional regulator  26.53 
 
 
250 aa  72.8  0.000000000004  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  26.53 
 
 
250 aa  72.8  0.000000000004  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  28.49 
 
 
231 aa  73.2  0.000000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_007953  Bxe_C0749  Crp/FNR family transcriptional regulator  25.68 
 
 
242 aa  72.8  0.000000000004  Burkholderia xenovorans LB400  Bacteria  normal  0.887641  normal  0.079497 
 
 
-
 
NC_012850  Rleg_2360  transcriptional regulator, Crp/Fnr family  30.18 
 
 
240 aa  73.2  0.000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.948966  hitchhiker  0.00636029 
 
 
-
 
NC_011369  Rleg2_2118  transcriptional regulator, Crp/Fnr family  26.79 
 
 
240 aa  73.2  0.000000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00291012 
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  26.53 
 
 
250 aa  72.8  0.000000000004  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  26.53 
 
 
250 aa  72.8  0.000000000004  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_003295  RSc1283  putative fumarate and nitrate reduction regulatory transcription regulator protein  28.42 
 
 
242 aa  72.8  0.000000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0516193  normal  0.32826 
 
 
-
 
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