More than 300 homologs were found in PanDaTox collection
for query gene Noc_1893 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013510  Tcur_1029  methylmalonyl-CoA mutase, large subunit  50.35 
 
 		 1081 aa  1072    Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc0237  putative methylmalonyl-CoA mutase protein  51.93 
 
 		 1099 aa  1107    Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.556775 
 
 
-
 
NC_007298  Daro_0243  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  50.79 
 
 		 1116 aa  1115    Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2811  methylmalonyl-CoA mutase, N-terminal  50.26 
 
 		 1080 aa  1059    Thermobifida fusca YX  Bacteria  normal  0.153738  n/a   
 
 
-
 
NC_007347  Reut_A0253  methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal  51.99 
 
 		 1093 aa  1110    Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007484  Noc_1893  methylmalonyl-CoA mutase-like  100 
 
 		 1139 aa  2345    Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1342  methylmalonyl-CoA mutase, large subunit  51.92 
 
 		 1115 aa  1172    Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_1722  methylmalonyl-CoA mutase-like  52.34 
 
 		 1082 aa  1140    Geobacter metallireducens GS-15  Bacteria  normal  0.181913  normal  0.685956 
 
 
-
 
NC_013757  Gobs_2225  methylmalonyl-CoA mutase, large subunit  50.62 
 
 		 1077 aa  1059    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.552157  n/a   
 
 
-
 
NC_013730  Slin_2256  Methylmalonyl-CoA mutase  53.91 
 
 		 1110 aa  1243    Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.642899 
 
 
-
 
NC_007777  Francci3_3652  methylmalonyl-CoA mutase  50.39 
 
 		 1105 aa  1086    Frankia sp. CcI3  Bacteria  normal  0.587052  normal  1 
 
 
-
 
NC_009921  Franean1_1077  methylmalonyl-CoA mutase, large subunit  49.66 
 
 		 1133 aa  1050    Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.953537 
 
 
-
 
NC_013061  Phep_1164  Methylmalonyl-CoA mutase  55.65 
 
 		 1131 aa  1288    Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_0095  methylmalonyl-CoA mutase, large subunit  51.54 
 
 		 1095 aa  1108    Ralstonia pickettii 12D  Bacteria  normal  0.778156  normal  0.758233 
 
 
-
 
NC_007908  Rfer_3612  methylmalonyl-CoA mutase  49.96 
 
 		 1113 aa  1087    Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2277  methylmalonyl-CoA mutase, large subunit  49.96 
 
 		 1092 aa  1026    Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_2289  Methylmalonyl-CoA mutase  59.88 
 
 		 1144 aa  1372    Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.0243844 
 
 
-
 
NC_007948  Bpro_4054  methylmalonyl-CoA mutase  49.32 
 
 		 1139 aa  1051    Polaromonas sp. JS666  Bacteria  normal  0.632309  normal  0.527832 
 
 
-
 
NC_007951  Bxe_A4277  methylmalonyl-CoA mutase  50.45 
 
 		 1272 aa  949    Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.0862944 
 
 
-
 
NC_011662  Tmz1t_3371  methylmalonyl-CoA mutase, large subunit  51.05 
 
 		 1088 aa  1113    Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0089  methylmalonyl-CoA mutase, large subunit  51.28 
 
 		 1095 aa  1098    Ralstonia pickettii 12J  Bacteria  normal  0.571974  normal  1 
 
 
-
 
NC_007973  Rmet_0210  methylmalonyl-CoA mutase  51.62 
 
 		 1093 aa  1110    Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_3844  methylmalonyl-CoA mutase, large subunit  50.52 
 
 		 1096 aa  1087    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_012793  GWCH70_3339  methylmalonyl-CoA mutase, large subunit  52.88 
 
 		 1085 aa  1162    Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_0431  methylmalonyl-CoA mutase, large subunit  55.72 
 
 		 1298 aa  743    Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_3169  methylmalonyl-CoA mutase, large subunit  51.18 
 
 		 1097 aa  1074    Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_2838  methylmalonyl-CoA mutase, large subunit  51.81 
 
 		 1082 aa  1156    Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_2332  methylmalonyl-CoA mutase  52.53 
 
 		 1146 aa  1228    Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_2188  methylmalonyl-CoA mutase, large subunit  51.09 
 
 		 1086 aa  1110    Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00063386  n/a   
 
 
-
 
NC_008699  Noca_4143  methylmalonyl-CoA mutase, large subunit  49.56 
 
 		 1043 aa  1001    Nocardioides sp. JS614  Bacteria  normal  0.578246  n/a   
 
 
-
 
NC_012918  GM21_1375  methylmalonyl-CoA mutase, large subunit  51.99 
 
 		 1082 aa  1156    Geobacter sp. M21  Bacteria  n/a    normal  0.0491198 
 
 
-
 
NC_014230  CA2559_06870  methylmalonyl-CoA mutase  52.85 
 
 		 1139 aa  1234    Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_3524  methylmalonyl-CoA mutase, large subunit  50 
 
 		 1097 aa  1074    Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_1068  Methylmalonyl-CoA mutase  54.8 
 
 		 1108 aa  1246    Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_24570  methylmalonyl-CoA mutase family protein  51.02 
 
 		 1079 aa  1035    Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.990884 
 
 
-
 
NC_008825  Mpe_A0903  methylmalonyl-CoA mutase  51.14 
 
 		 1096 aa  1092    Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3448  methylmalonyl-CoA mutase, large subunit  52.93 
 
 		 1086 aa  1172    Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010622  Bphy_0156  methylmalonyl-CoA mutase, large subunit  51.44 
 
 		 1127 aa  1109    Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.308187 
 
 
-
 
NC_014165  Tbis_1618  methylmalonyl-CoA mutase large subunit  50.52 
 
 		 1083 aa  1083    Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3556  Methylmalonyl-CoA mutase  50.04 
 
 		 1073 aa  1056    Streptosporangium roseum DSM 43021  Bacteria  normal  0.0534628  normal  0.668167 
 
 
-
 
NC_013501  Rmar_0923  Methylmalonyl-CoA mutase  56.27 
 
 		 1150 aa  1227    Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  36.28 
 
 		 550 aa  294  7e-78  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.511417 
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  33.49 
 
 		 560 aa  282  2e-74  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  35.83 
 
 		 588 aa  280  8e-74  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012029  Hlac_1182  methylmalonyl-CoA mutase, large subunit  35.54 
 
 		 566 aa  280  1e-73  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  1  hitchhiker  0.00000166 
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  35.67 
 
 		 588 aa  277  9e-73  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  35.7 
 
 		 521 aa  276  2.0000000000000002e-72  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007760  Adeh_1834  methylmalonyl-CoA mutase  36.01 
 
 		 588 aa  275  4.0000000000000004e-72  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.243116  n/a   
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  34.07 
 
 		 570 aa  272  2.9999999999999997e-71  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  34.74 
 
 		 558 aa  272  2.9999999999999997e-71  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal  1 
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  32.55 
 
 		 559 aa  270  1e-70  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.220657 
 
 
-
 
NC_013946  Mrub_0698  methylmalonyl-CoA mutase large subunit  36.35 
 
 		 551 aa  270  2e-70  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_3380  methylmalonyl-CoA mutase, large subunit  35.09 
 
 		 559 aa  264  6e-69  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1720  methylmalonyl-CoA mutase, large subunit  36.2 
 
 		 551 aa  263  1e-68  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  33.39 
 
 		 551 aa  261  4e-68  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013744  Htur_4362  methylmalonyl-CoA mutase, large subunit  33 
 
 		 566 aa  260  8e-68  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.15027  n/a   
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  34.22 
 
 		 529 aa  256  2.0000000000000002e-66  Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal  1 
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  31.38 
 
 		 554 aa  255  3e-66  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013922  Nmag_0817  methylmalonyl-CoA mutase, large subunit  33.16 
 
 		 566 aa  253  1e-65  Natrialba magadii ATCC 43099  Archaea  normal  0.950939  n/a   
 
 
-
 
NC_008025  Dgeo_0862  methylmalonyl-CoA mutase, alpha subunit  35.64 
 
 		 548 aa  253  2e-65  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.473507 
 
 
-
 
NC_013202  Hmuk_2889  methylmalonyl-CoA mutase, large subunit  32.75 
 
 		 560 aa  251  4e-65  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0576126  normal  0.895278 
 
 
-
 
NC_013132  Cpin_6260  methylmalonyl-CoA mutase, large subunit  32.63 
 
 		 517 aa  250  1e-64  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.593051 
 
 
-
 
NC_009675  Anae109_1988  methylmalonyl-CoA mutase, large subunit  34.6 
 
 		 588 aa  250  1e-64  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  32.33 
 
 		 542 aa  247  9e-64  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.85938 
 
 
-
 
NC_009253  Dred_1768  methylmalonyl-CoA mutase, large subunit  30.72 
 
 		 560 aa  246  9.999999999999999e-64  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0288235  n/a   
 
 
-
 
NC_009717  Xaut_5021  methylmalonyl-CoA mutase, large subunit  32.21 
 
 		 562 aa  245  3.9999999999999997e-63  Xanthobacter autotrophicus Py2  Bacteria  normal  0.749996  normal  1 
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  32.28 
 
 		 552 aa  244  5e-63  Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_009050  Rsph17029_3657  methylmalonyl-CoA mutase, large subunit  32.69 
 
 		 563 aa  241  5.999999999999999e-62  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.748454  normal  0.0699604 
 
 
-
 
NC_013216  Dtox_1909  methylmalonyl-CoA mutase, large subunit  30.58 
 
 		 560 aa  240  1e-61  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.699759  normal  0.051216 
 
 
-
 
NC_008826  Mpe_B0541  methylmalonyl-CoA mutase  32.16 
 
 		 562 aa  240  1e-61  Methylibium petroleiphilum PM1  Bacteria  normal  0.46948  hitchhiker  0.00133344 
 
 
-
 
NC_008554  Sfum_0458  methylmalonyl-CoA mutase, large subunit  31.35 
 
 		 559 aa  236  2.0000000000000002e-60  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.484451  normal  0.420898 
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  39.74 
 
 		 563 aa  234  5e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  36.96 
 
 		 551 aa  230  1e-58  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_008576  Mmc1_0388  methylmalonyl-CoA mutase  31.11 
 
 		 714 aa  227  1e-57  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_4310  methylmalonyl-CoA mutase, large subunit  30.93 
 
 		 525 aa  226  2e-57  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.57946 
 
 
-
 
NC_009952  Dshi_0726  methylmalonyl-CoA mutase  32.69 
 
 		 712 aa  225  4e-57  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.999011  normal  1 
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  40.05 
 
 		 555 aa  224  6e-57  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  37.7 
 
 		 557 aa  224  6e-57  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  36.29 
 
 		 559 aa  224  7e-57  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  35.92 
 
 		 551 aa  224  8e-57  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  38.21 
 
 		 537 aa  224  8e-57  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0115893 
 
 
-
 
NC_013947  Snas_0775  methylmalonyl-CoA mutase large subunit  37.4 
 
 		 526 aa  223  9.999999999999999e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  36.86 
 
 		 550 aa  223  9.999999999999999e-57  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_002939  GSU3302  methylmalonyl-CoA mutase, putative  37.47 
 
 		 552 aa  223  1.9999999999999999e-56  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00398466  n/a   
 
 
-
 
NC_013595  Sros_1703  Methylmalonyl-CoA mutase  40.16 
 
 		 555 aa  223  1.9999999999999999e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.236995 
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  38.34 
 
 		 563 aa  223  1.9999999999999999e-56  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal  1 
 
 
-
 
NC_009380  Strop_3608  methylmalonyl-CoA mutase, large subunit  38.9 
 
 		 562 aa  222  3e-56  Salinispora tropica CNB-440  Bacteria  normal  0.898932  normal  0.283748 
 
 
-
 
NC_008699  Noca_1802  methylmalonyl-CoA mutase  39.34 
 
 		 562 aa  222  3e-56  Nocardioides sp. JS614  Bacteria  normal  0.241911  n/a   
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  37.4 
 
 		 531 aa  221  3.9999999999999997e-56  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR1190  methylmalonyl-CoA mutase  32.21 
 
 		 712 aa  221  6e-56  Brucella suis 1330  Bacteria  normal  0.942727  n/a   
 
 
-
 
NC_013169  Ksed_22170  methylmalonyl-CoA mutase  30.59 
 
 		 754 aa  221  6e-56  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.366718  normal  0.398515 
 
 
-
 
NC_007493  RSP_2192  methylmalonyl-CoA mutase  31.75 
 
 		 709 aa  220  8.999999999999998e-56  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.172259  n/a   
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  38.68 
 
 		 567 aa  220  1e-55  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_1393  methylmalonyl-CoA mutase large subunit  37.25 
 
 		 578 aa  219  2e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_1454  methylmalonyl-CoA mutase  29.51 
 
 		 599 aa  219  2e-55  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_4261  methylmalonyl-CoA mutase, large subunit  31.35 
 
 		 529 aa  219  2e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.440573 
 
 
-
 
NC_013061  Phep_3607  methylmalonyl-CoA mutase, large subunit  30.37 
 
 		 515 aa  219  2.9999999999999998e-55  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  34.59 
 
 		 532 aa  219  2.9999999999999998e-55  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_008025  Dgeo_1320  methylmalonyl-CoA mutase  31.59 
 
 		 722 aa  219  2.9999999999999998e-55  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  31.58 
 
 		 709 aa  219  2.9999999999999998e-55  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal  1 
 
 
-
 
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