| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4277 |
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| Symbol | |
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| ID | 4004221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 216029 |
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| End bp | 219847 |
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| Gene Length | 3819 bp |
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| Protein Length | 1272 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637945373 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_556774 |
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| Protein GI | 91781568 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0862944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TGTCCACGCC GCAGCGCGCC GGCAGCCACA AGCTGCCCGC GGGCCGGCGA
CTGCGCTTTG TCACCGCGGC TGCGTTGTTC GACGGCCACG ATGCGTCGAT CAATATCATG
CGGCGCATTC TTCAGGCGAG CGGCGTCGAG GTGATTCACC TCGGCCACAA CCGCTCCGTC
GATGAAGTCG CCACCGCCGC GCTGCACGAG GACGCCGACG GCGTCGCCGT GTCCAGCTAC
CAGGGCGGTC ACAACGAATA TTTCCGCTAT CTGGTCGACT TGCTGCGCGC GCGCGGCGGC
GAGCGCATCA AGGTGTTCGG CGGCGGCGGC GGGGTGATCG TCCCCGAAGA GATCGCCGGG
CTCGAACGCT ATGGCGTCGA GAAGATCTAT TCGCCGCAGG ACGGCCAGCG GCTTGGTCTG
CAAGGCATGA TCGACGATAT GATCGCGCGC TGCGCCGAAG GTGCGCGCGC GGCGGCGGCC
ACAGGGGAGA GTCAGGTCGG CGCGTGGGCG GCGGAGTTTT CGGAGCATGG GCTGCCGCGT
TTTGATTCGC GCGACGACGT GGGTGTTGAC CGGCAGGGGG CCGTCGCGCG CAATCCGTCG
AGCGAGGCGA GTCGCGTGGC CGCGGCGGGG CGCGGCGATC ATTTGGACAG AGGCGTCCGC
GCGGCCAGCA CGGCCGACAC GGCCGACACG GCCAACACGG CCAACACGGC CAACACGGCC
AACACTGGCA GCGTAGCGGA CGCAGCGGAC GCAGCGGACG CAGCGGACGC AGCGGACGCA
GCCGACGCAG CCAGCACAGC CAGCACAGCC AGCACAGCCA GCACAGCTAG CACAGCTAGC
ACAGCCGGCA TCCCCGACCC GGCATCCCTG GTTTTCCGCC GACTCGCGCA ACTCATCAGC
GCGTTCGAAA CGGCCGCCAT CGACGTCAAC ACGCGGGACA AGCTGTCCGC TCTAGCAGAA
GTAACCGCGA TCCCCCTCCT CGGCATTACC GGAACCGGCG GCGCCGGCAA ATCGTCGCTC
ACCGACGAAT TGATTCGTCG CTTTCGCCTC GACTACGGCG ACGCCCTCAC CATCGCCGTG
CTCGCCATCG ACCCTTCGCG CCGCAAGTCC GGCGGCGCGC TGCTGGGCGA CCGCATCCGC
ATGAACGCGA TCGGCGACTG GGGCGGCGGC GCGCGCGTGT ACATGCGCTC GATGGCGACG
CGCGAAGCAT CGAGCGAAAT CTCCGACTCG CTGCCCGACG CGCTGATGCT CTGCAAGGCG
GCGGGCTTCG ATCTGATCGT CGTGGAAACA TCCGGCATCG GCCAGGGCAA TGCGGCGATC
GTGCCGTTCG TCGACGAATC GCTGTATGTC ATGACGCCGG AATTCGGCGC GGCCAGCCAG
CTGGAGAAGA TCGACATGCT CGACTTTGCC AGCTTCGTCG CGATCAACAA GTTCGATCGC
AAAGGCGCGC GGGACGCGTT GCGCGATGTC GCCAAGCAGG TGCAGCGCAA TCGCGCCGAC
TTCGCGAAGT CGCCGGAAGC GATGCCGGTG TTCGGAACGA TCGCCTCGCG CTTTAACGAC
GACGGCGTGA CCGCGCTGTA TCGGCACGTT GCCGAAGCGT TGCGCAAGCA TGGTTTGCGT
TCGGGCGGCG GCCGTCTTGC CGCGCCCGAA GATCTGCGTT TTTCGAGCGG GCGCAACGCC
ATCGTGCCGC CCGCCCGCGT GCGTTATCTG GCGGATATTG CGCAGACGAT CCACGCTTAT
CGCGAGCGAG CCGATGCGCA AGCGCGCCTT GCGCGCGAGC GCTGGCAGCT GATCGAGGCG
CGCAGGATGC TCGTTGAGAC GGGTGAGGCC GCAAGGTCCA CTGTTGCCAC AAGTGCAAGC
CCAGGAGCAA GCGCAAGCTC GAAAGCAAAC GCATGTACAA GCACAAGCTC GAAAGCAAAC
GCAAGCCCAG GAGCAAACAC AACCGCGAAC TCAAACGCTT CCGCAACCAG CGGCACAGCC
ACCCCAACCG ACGCGCTCAA CCCAACCCTC TCGCAACTCG ACACGCTGAT CACCCAACGC
ACCGCCTCGC TCGGCGAACG CGAGCGCATC CTCCTCGACA CCTGGCCGGA AATCGTCGCC
GCTTACTCGG GCACTGAACA CATCGTCCGC GTCCGCGACC GTGAAATCCG CACCGCGCTG
ACCGTCGCGA CGCTTTCCGG CTCCGAAGTC CGCAAAGTCT CCCTGCCGAA ATTCGTCGAT
CACGGCGAGA TTCTGCGCTG GCTGATGCTC GACAATCTGC CCGGCTACTT CCCCTTCACC
GCCGGCGTGT TCCCGTTCCG CCGCGAAAAC GAAGACCCGA CCCGCATGTT CGCCGGCGAA
GGCGATCCGC AACGCACCAA TCGCCGCTTC AAACTGCTCT CGGAAGGCAT GCCGGCCAAA
CGTCTGTCGA CTGCGTTCGA TTCGGTCACG CTGTACGGTG AAGAGCCGCA CGAGCGTCCC
GACATCTACG GCAAAGTGGG CAATTCCGGC GTCTCCGTCG CGACGCTCGA CGACATGAAG
ACGCTCTACG ACGGTTTCGA CCTCTGCGCG CCGGAAACCT CGGTCTCGAT GACGATCAAC
GGCCCCGCGC CGACCATCCT GGCGATGTTC TTCAACGTCG CGATCGATCA GCAAATCGCG
CGTACGACAC AGCGGCAAGG CCGCCCGCTC ACCGAAGACG AACTCGCCGC GACGCGCCGC
ACCGCGCTGG AAAACGTGCG CGGCACCGTG CAGGCCGATA TCCTGAAGGA AGACCAAGGC
CAGAACACCT GCATTTTCTC GACCGAATTC AGCCTGAAGG TGATGGGCGA TATTCAGGCG
TACTTCGTCG AGCATGGCGT GCGCAATTTC TATTCGGTCT CGATCTCCGG CTATCACATC
GCCGAAGCCG GCGCGAATCC GATTTCGCAA CTCGCGTACA CGCTCGCGAA CGGCTTCACG
TATGTGGAGG CCTATCTCGC CCGCGGCATG TCGATCGACG ACTTCGCGCC GAATCTGTCG
TTCTTCTTTT CAAACGGCAT GGACCCGGAG TACACGGTGC TGGGCCGCGT CGCGCGACGC
ATCTGGGCCG TCGCCATGCG CGAGCGCTAC GGCGCGAACG AACGCAGCCA GAAGCTCAAG
TATCACGTGC AGACGTCGGG CCGCAGCCTG CACGCGCAGG AGATCGACTT CAACGATATC
CGCACCACGC TGCAGGCGCT GATCGCGATC TACGACAATT GCAATTCGCT CCATACGAAT
GCGTTCGACG AAGCGATCAC CACGCCCACC GAGGAATCCG TGCGCCGCGC GGTGGCGATC
CAGTTGATTA TCAACCGTGA ATGGGGACTC GCGAAGAATC AGAATCCGAA TCAGGGCAGC
TTCGTGATCG AGGAGCTGAC CGACCTGGTG GAAGAAGCGG TTCTGGCCGA ATTCGACCGG
CTGACCGAGC GAGGCGGCGT ACTGGGTGCG ATGGAAACCG GCTATCAGCG CGGGCGCATC
CAGGACGAGT CGATGCTGTA TGAGCACCGC AAGCACGACG GGTCTTATCC GATCGTCGGC
GTGAACACGT TCTTGAGCGC GCATCCGCAT GAAGCGCCGC AGCCGATCGC GCTAGCCCGT
TCCACCGACG ATGAGAAACA AAGCCAGTTG CAACGCCTGC GTGCTTTCCA GGCGCAGCAT
CGCGACGCGG CGCCGGCCGC GCTCGAACGC CTGAAGCGCG CCGTGATCGA CGATGAAAAT
GTGTTCGCGG TGCTGATGGA TGTCGTGCGT GTCTGCTCGC TCGGACAGAT CACGCACGCG
CTGTTTGAAG TGGGCGGGCA GTACCGCCGC AATATGTAA
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| Protein sequence | MTDLSTPQRA GSHKLPAGRR LRFVTAAALF DGHDASINIM RRILQASGVE VIHLGHNRSV
DEVATAALHE DADGVAVSSY QGGHNEYFRY LVDLLRARGG ERIKVFGGGG GVIVPEEIAG
LERYGVEKIY SPQDGQRLGL QGMIDDMIAR CAEGARAAAA TGESQVGAWA AEFSEHGLPR
FDSRDDVGVD RQGAVARNPS SEASRVAAAG RGDHLDRGVR AASTADTADT ANTANTANTA
NTGSVADAAD AADAADAADA ADAASTASTA STASTASTAS TAGIPDPASL VFRRLAQLIS
AFETAAIDVN TRDKLSALAE VTAIPLLGIT GTGGAGKSSL TDELIRRFRL DYGDALTIAV
LAIDPSRRKS GGALLGDRIR MNAIGDWGGG ARVYMRSMAT REASSEISDS LPDALMLCKA
AGFDLIVVET SGIGQGNAAI VPFVDESLYV MTPEFGAASQ LEKIDMLDFA SFVAINKFDR
KGARDALRDV AKQVQRNRAD FAKSPEAMPV FGTIASRFND DGVTALYRHV AEALRKHGLR
SGGGRLAAPE DLRFSSGRNA IVPPARVRYL ADIAQTIHAY RERADAQARL ARERWQLIEA
RRMLVETGEA ARSTVATSAS PGASASSKAN ACTSTSSKAN ASPGANTTAN SNASATSGTA
TPTDALNPTL SQLDTLITQR TASLGERERI LLDTWPEIVA AYSGTEHIVR VRDREIRTAL
TVATLSGSEV RKVSLPKFVD HGEILRWLML DNLPGYFPFT AGVFPFRREN EDPTRMFAGE
GDPQRTNRRF KLLSEGMPAK RLSTAFDSVT LYGEEPHERP DIYGKVGNSG VSVATLDDMK
TLYDGFDLCA PETSVSMTIN GPAPTILAMF FNVAIDQQIA RTTQRQGRPL TEDELAATRR
TALENVRGTV QADILKEDQG QNTCIFSTEF SLKVMGDIQA YFVEHGVRNF YSVSISGYHI
AEAGANPISQ LAYTLANGFT YVEAYLARGM SIDDFAPNLS FFFSNGMDPE YTVLGRVARR
IWAVAMRERY GANERSQKLK YHVQTSGRSL HAQEIDFNDI RTTLQALIAI YDNCNSLHTN
AFDEAITTPT EESVRRAVAI QLIINREWGL AKNQNPNQGS FVIEELTDLV EEAVLAEFDR
LTERGGVLGA METGYQRGRI QDESMLYEHR KHDGSYPIVG VNTFLSAHPH EAPQPIALAR
STDDEKQSQL QRLRAFQAQH RDAAPAALER LKRAVIDDEN VFAVLMDVVR VCSLGQITHA
LFEVGGQYRR NM
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