| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1274 |
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| Symbol | |
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| ID | 8332609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 1446226 |
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| End bp | 1447917 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644954421 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_003112040 |
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| Protein GI | 256390476 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCCG AGCAGATTTC CGCCGGCCGC GAGCGCTGGC AGGCGCGCTA CGACGCCGCG
CGCAAGCGGG ACGCCGATTT CACCACGATC TCCGGCTCCG GCGTCGAGCC GGTGTACGGC
CCGCCGGAGG GTTCCGAGGT CCCGGACTTC GAGCGGATCG GGTGGCCGGG GGAATTCCCC
TACACGCGCG GGATCCACCC GACCGGCTAC CGCGGCAAGC CGTGGACGAT CCGGCAGTTC
GCCGGCTTCG GCAACGCCGA GCAGACCAAC GAGCGCTACC GGATGATCCT GGACGCCGGC
GGCGGCGGGC TGTCAGTGGC CTTCGACATG CCGACCCTGA TGGGGTACGA CTCCGACTCC
GGCCGCGCCC TCGGCGAGGT CGGGCACTGC GGCGTGGCCA TCGACTCCGC CGCCGACATG
GAGGTGCTCT TCCGCGGCAT CCCGCTGGGC GAGGTCACCA CCTCGATGAC GATCAGCGGC
CCGGCGGTCC CGGTGTTCTG CATGTACCTG GTCGCCGCCG AGCGTCAGGG CGTGGACATC
AGCCGGCTCA ACGGCACGCT GCAGACCGAC ATCTTCAAGG AGTACATCGC GCAGAAGGAG
TGGCTGTTCG ACCCCGAGCC GCACCTGCGC CTGATCGGCG ACCTGATGGA GTTCACCGCC
GAGAAGGTCC CGGCGTACAA GCCGCTGTCG GTCTCCGGCT ACCACATCCG CGAGGCCGGT
GCGACGGCGG CGCAGGAGCT GGCGTTCACC CTCGCCGACG GCTTCGGCTA CGTCGAGCTG
GGCCTGTCGC GCGGCATGGA CGTCGACGTC TTCGCCCCCG GGCTGTCGTT CTTCTTCGAC
GCGCACGTGG AGTTCTTCGA GGAGATCGCG AAGTTCCGCG CCGCCCGCCG CATCTGGGCC
CGCTGGATGC GCGACGTCTA CGGCGCCAAG ACTGAGAAGG CGCAGTGGCT GCGCTTCCAC
ACCCAGACCG CCGGCGTCTC GCTGACCGCG CAGCAGCCGG ACAACAACGT GGTCCGCACC
GCGATCGAGG CGCTGGCCGG CGTCCTGGGC GGCACCAACT CGCTGCACAC CAACGCCCTG
GACGAGGTGC TGGCGCTGCC GAGCGCGAAG TCCGCGGAGA TCGCGCTGCG CACGCAGCAG
GTGATCATGG AGGAGACCGG CGTGGCGAAC GTCGCCGACC CCCTCGGCGG CAGCTGGTAC
GTCGAGGCGC TGACCGACCG TATCGAGGCC GAGGCCGAGG CGATCTTCCA GCGCATCAAG
GACCTGGCGC CCAACGGCGC GCAGCACCCG GTCGGCCCGA TGACCGCCGG TCTGCTGCGC
GGCATCGAAG ACGGCTGGTT CACCTCCGAG ATCGCCGAGG CGTCCTTCGC CTACCAGCGC
GCGGTCGAGA AGGGCGACAA GCGCGTCGTC GGCGTCAACG TGCACACCGA CTCGATCGAG
GAGCCGCTGG AGATCCTGCG GATCTCGCAC GAGGTGGAGC GCGAGCAGGT GCGCGTCCTC
GGCGCGCGCA AGGCCGAGCG CGACGGCGCC GCGGTCGAGA CCGCGCTGGC GGCGATGCTC
GACGCGGCAC GCTCCGGCGC GAACATGGTG CCGGCGATGC TGGACGCGGT GCGTGCCGAG
GCGACGCTCG GTGAGATCTG CGACGCGCTG CGCGCGGAGT GGGGCGTCTA CCGGGAGCCG
GCGCGCATCT GA
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| Protein sequence | MDSEQISAGR ERWQARYDAA RKRDADFTTI SGSGVEPVYG PPEGSEVPDF ERIGWPGEFP
YTRGIHPTGY RGKPWTIRQF AGFGNAEQTN ERYRMILDAG GGGLSVAFDM PTLMGYDSDS
GRALGEVGHC GVAIDSAADM EVLFRGIPLG EVTTSMTISG PAVPVFCMYL VAAERQGVDI
SRLNGTLQTD IFKEYIAQKE WLFDPEPHLR LIGDLMEFTA EKVPAYKPLS VSGYHIREAG
ATAAQELAFT LADGFGYVEL GLSRGMDVDV FAPGLSFFFD AHVEFFEEIA KFRAARRIWA
RWMRDVYGAK TEKAQWLRFH TQTAGVSLTA QQPDNNVVRT AIEALAGVLG GTNSLHTNAL
DEVLALPSAK SAEIALRTQQ VIMEETGVAN VADPLGGSWY VEALTDRIEA EAEAIFQRIK
DLAPNGAQHP VGPMTAGLLR GIEDGWFTSE IAEASFAYQR AVEKGDKRVV GVNVHTDSIE
EPLEILRISH EVEREQVRVL GARKAERDGA AVETALAAML DAARSGANMV PAMLDAVRAE
ATLGEICDAL RAEWGVYREP ARI
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