| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0210 |
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| Symbol | |
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| ID | 4036996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 221032 |
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| End bp | 224313 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975583 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_582365 |
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| Protein GI | 94309155 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC TTTCTGATGT GAGCAGGACC GCGGCCGCCA AGCCGCCGGC AGTGCCTGGC
CGGGGACCGG CCAACAAGGT GCGCTTTGTC ACCGCGGCGT CGCTGTTCGA CGGCCACGAC
GCGTCGATCA ACATCATGCG GCGCATCCTT CAGTCGCAGG GGTGTGAAGT CATCCACCTC
GGCCACAACC GCTCCGTGCA AGAGGTCGTC ACGGCCGCGC TGCAGGAAGA CGTGCAGGGC
ATCGCCATCT CCAGCTACCA GGGCGGGCAC GTCGAATACT TCAAGTACAT GATCGATCTG
CTGCGCGAGC ACGGCGGCGA GCACATCCAG GTGTTCGGCG GCGGCGGCGG CGTGATCGTG
CCGGACGAGA TTCGCGAGCT CCAGGCCTAC GGCGTGGCCC GCATCTACAG TCCCGAGGAC
GGCCAGCGCA TGGGGCTGGC CGGCATGATC ACCGACATGG CGCAGCGTTG CGATATCGAC
TTGACGCGCT ACGCACCCAC TACGCTCGAC ACCGTGGTCG CCGGCGACCG CCGCGCGCTG
GCGCAACTGA TTACCGCGCT CGAGAACGGC AAGGCGGACC CGGAACTGGT CAGCGCATTG
CATGCCCAGG CGAAGGCCGC TGCCGTGCCG GTCCTGGGCA TCACTGGCAC GGGCGGCGCG
GGCAAGTCAT CGCTGACCGA TGAACTGATT CGCCGCTTCC GGCTTGATCA GGACGACGCG
CTTTCGATCG CCGTGATCTC GATCGACCCG TCGCGCCGCA AATCGGGTGG CGCATTGCTG
GGCGACCGCA TTCGCATGAA TGCGATCAAC CACCCGAACA TCTTCATGCG TTCGCTGGCC
ACCCGCGAGG CTGGCTCGGA GATCTCCCAG GCGCTGCCCG ACGTCATCGC CGCGTGCAAG
GCGGCGCGTT TCGATCTCGT GATCGTGGAG ACGTCCGGCA TCGGCCAGGG CGACGCAGCC
ATCGTGCCGC ACGTCGACCT GTCGCTCTAC GTGATGACGC CGGAATTCGG CGCGGCCAGC
CAGCTCGAGA AGATCGACAT GCTCGACTTC GCCGACTTCG TGGCCATCAA CAAGTTCGAC
CGCAAGGGTG CGCAGGACGC CTGGCGCGAC GTGGCCAAGC AGGTGCAGCG CAACCGCGAG
CAATGGCACA GCCGGGCCGA GGACATGCCG GTCTATGGCA CGCAGGCATC GCGCTTCAAT
GACGATGGCG TGACCATGCT CTACCAGGGA CTGGTGGGGG CGCTGGGCGC GCGTGGCATG
AGCCTGAAGC CGGGCACGCT GCCGAATCTG GAAGGCCGGA TCTCGACCGG CCAGAATGTG
ATCGTGCCGC CTGCGCGCAG CCGGTATCTG GCGGAACTGG CCGATACGGT GCGCGCCTAC
CATCGCCGCG TGGTCGCCCA GAGCAAACTG GCGCGTGAGC GCCAGCAACT GCGCGCGGCG
CATGACATGC TGCAGGGCGC TGGCCACGAG AGTGCCGCGC TCGAGACGCT GGCCAGCGAA
CGCGACGTCT CGCTTGGCGC GGTGGAGCGC AAGCTGCTGG CGATGTGGCC GCAAATGCAG
CAGGCCTACA GCGGCGACGA GTACGTCGTG AAGATTCGCG ACAAGGAAAT CCGCACCGGC
CTGATCAGCA CCACGCTGTC GGGCACCAAG ATCCGCAAGG TGGTGCTGCC GCGCTTCGAG
GACGAAGGCG AGATCCTGAA GTGGCTGATG CGCGAGAACG TGCCGGGCAG CTTCCCGTAC
ACGGCCGGCG TGTTCGCGTT CAAGCGCGAG GGTGAGGACC CCACGCGCAT GTTCGCGGGC
GAGGGCGATG CTTTCCGCAC CAATCGCCGC TTCAAGCTCG TTTCCGAAGG CATGGAGGCC
AAGCGGCTGT CCACGGCGTT CGACTCGGTC ACGCTCTACG GTGAAGACCC GCACGAGCGG
CCGGACATCT ACGGCAAGGT GGGCAACTCC GGCGTGTCGA TCGCCACGCT CGAGGACATG
AAGGTTCTCT ACGATGGCTT CGACCTGACC AACCCGTCCA CGTCGGTCTC GATGACGATC
AACGGCCCGG CGCCCACGAT CCTGGCGATG TTCATGAACA CGGCCATCGA CCAGCAGATC
GACCGTTTCC GCGCCGATAA CGGCCGCGAT CCGACAGCCG ACGAGGAAGC GAAGATTCGC
GCGTGGGTGC TGCAGAACGT GCGCGGCACG GTGCAGGCTG ACATCCTGAA GGAAGACCAG
GGCCAGAATA CGTGCATCTT CTCGACCGAG TTCTCGCTCA AGGTGATGGG GGACATCCAG
GAGTACTTCG TCCACCATCA GGTGCGCAAC TTCTACTCCG TGTCGATCTC GGGCTATCAC
ATCGCCGAAG CCGGTGCGAA TCCGATTTCG CAACTGGCCT TCACGCTGGC CAACGGCTTC
ACGTATGTCG AGGCCTATCT GGCGCGCGGC ATGCATATCG ACGACTTCGC GCCCAACCTG
TCGTTCTTCT TCTCGAACGG CATGGACCCG GAGTACAGCG TGCTGGGCCG CGTGGCACGC
CGCATCTGGG CGGTGACGAT GCGCGACAAG TACGGCGCCA ACGACCGCAG CCAGAAGCTC
AAGTACCACA TCCAGACATC GGGCCGGTCA CTGCACGCGC AGGAGATCGA TTTCAACGAC
ATCCGCACCA CGCTGCAGGC CCTGATCGCG ATCTACGACA ACTGCAATTC GCTGCACACC
AACGCCTATG ACGAAGCCAT CACCACCCCG ACGGCCGAAT CGGTGCGCCG GGCGCTGGCG
ATCCAGCTGA TCATCAATCG CGAATGGGGC GTGGCCAAGT GCGAGAACCC GAATCAGGGC
AGTTTCCTGA TCGAGGAACT GACCGATCTC GTCGAGGAGG CGGTGCTGCA GGAGTTCGAG
CGCATCGCCG AACGCGGCGG GGTGCTGGGC GCGATGGAAA CCGGCTACCA GCGCGGCAAG
ATTCAGGAGG AATCGCTGTA CTACGAACAG CTCAAGCACG ACGGCACCTT GCCGATCATC
GGCGTGAACA CGTTCCGCAA TCCGAACGGG GACCCGACGC CACAAACGCT GGAACTGGCC
CGCTCCAGCG AGGACGAGAA GCAGAGCCAG TTGCACCGCC TGACGGAATT CCATGGGGCG
CACCAGGCCG ATGCGGAGGC GATGCTGGCA AGGCTGCGCC AGGCCGTGAT CGACAACCGG
AACGTCTTTG CCGTGCTGAT GGACGCCGTG CGCGTGTGCT CGCTGGGGCA GATCACGCAC
GCGCTGTTCG AGGTCGGTGG GCAATACCGG CGCAATATGT AA
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| Protein sequence | MTDLSDVSRT AAAKPPAVPG RGPANKVRFV TAASLFDGHD ASINIMRRIL QSQGCEVIHL
GHNRSVQEVV TAALQEDVQG IAISSYQGGH VEYFKYMIDL LREHGGEHIQ VFGGGGGVIV
PDEIRELQAY GVARIYSPED GQRMGLAGMI TDMAQRCDID LTRYAPTTLD TVVAGDRRAL
AQLITALENG KADPELVSAL HAQAKAAAVP VLGITGTGGA GKSSLTDELI RRFRLDQDDA
LSIAVISIDP SRRKSGGALL GDRIRMNAIN HPNIFMRSLA TREAGSEISQ ALPDVIAACK
AARFDLVIVE TSGIGQGDAA IVPHVDLSLY VMTPEFGAAS QLEKIDMLDF ADFVAINKFD
RKGAQDAWRD VAKQVQRNRE QWHSRAEDMP VYGTQASRFN DDGVTMLYQG LVGALGARGM
SLKPGTLPNL EGRISTGQNV IVPPARSRYL AELADTVRAY HRRVVAQSKL ARERQQLRAA
HDMLQGAGHE SAALETLASE RDVSLGAVER KLLAMWPQMQ QAYSGDEYVV KIRDKEIRTG
LISTTLSGTK IRKVVLPRFE DEGEILKWLM RENVPGSFPY TAGVFAFKRE GEDPTRMFAG
EGDAFRTNRR FKLVSEGMEA KRLSTAFDSV TLYGEDPHER PDIYGKVGNS GVSIATLEDM
KVLYDGFDLT NPSTSVSMTI NGPAPTILAM FMNTAIDQQI DRFRADNGRD PTADEEAKIR
AWVLQNVRGT VQADILKEDQ GQNTCIFSTE FSLKVMGDIQ EYFVHHQVRN FYSVSISGYH
IAEAGANPIS QLAFTLANGF TYVEAYLARG MHIDDFAPNL SFFFSNGMDP EYSVLGRVAR
RIWAVTMRDK YGANDRSQKL KYHIQTSGRS LHAQEIDFND IRTTLQALIA IYDNCNSLHT
NAYDEAITTP TAESVRRALA IQLIINREWG VAKCENPNQG SFLIEELTDL VEEAVLQEFE
RIAERGGVLG AMETGYQRGK IQEESLYYEQ LKHDGTLPII GVNTFRNPNG DPTPQTLELA
RSSEDEKQSQ LHRLTEFHGA HQADAEAMLA RLRQAVIDNR NVFAVLMDAV RVCSLGQITH
ALFEVGGQYR RNM
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