| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0243 |
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| Symbol | |
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| ID | 3569635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 273719 |
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| End bp | 277069 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637678681 |
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| Product | methylmalonyl-CoA mutase, N-terminal:methylmalonyl-CoA mutase, C-terminal |
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| Protein accession | YP_283472 |
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| Protein GI | 71905885 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCG TCTATCGCCA CAATGGTGCG AGGGATAAAG CGGCCTACCA TAGGCGCCTT
TCCATCTTTT CCGATGAGGC TGACGTCATG ACCGATTTGT CCGTTGCCAA GAAGTTGTCC
CCGTACAAAC CCAAGAACAA GGTACGTTTC GTGACGGCCG CCTCGCTGTT CGACGGCCAC
GATGCATCGA TCAACATCAT GCGTCGCATC CTGCAATCGA CCGGTTCCGA AGTGATCCAC
CTTGGCCACA ACCGCTCGGT GCAGGAAATC GTCAATGCCG CGCTGCAGGA AGACGTGCAG
GGCATCTGCA TCACGTCTTA CCAAGGCGGC CACGTCGAAT TCTTCAAGTA CATGATCGAC
CTGCTCAAGG CCAACGGCGG TGCCAATATC AAGGTCTTCG GCGGTGGCGG CGGTGTGATC
GTGCCGTCCG AAATCAAGGA ACTGCACGAC TACGGCGTGA CCCGCATCTA TGCCCCGGAA
GACGGCGTCC ATATGGGTCT GCAGGGCATG ATCAACGAAG TCGTGCAGAA GTCCGACTTC
GACGTGGCCG ATGAAGGCGT GCCGACCGTC GAGCAAGTGC TGGCTGGCCT GAAGGCCGGT
GACAAGCGCT TGCTGGCCCG GGTCATCACC CTGCTCGAAA ACGGCGAAGC CCCGGCGCTC
AAGGAACCGC TGCTCAAGGC TGCCGCTGAA ACGAATATTC CGGTACTCGG GATTACCGGC
ACCGGTGGCG CCGGCAAGTC GTCGCTGACC GACGAGCTGG TCCGTCGCTT CCGCCTCGAC
CAGAACGACA GCGTCAAGAT TGGCCTGATC TCGATCGACC CGTCGCGCAA GCGCACTGGT
GGCGCCTTGT TGGGCGACCG TATCCGGATG AACGCCATCG AGCATCCGAA TATCTTCATG
CGTTCGCTGG CGACTCGCGA TACCGGTTCG GAAATCTCCG TTGCGCTGCC GGAAGTCATT
GCTGCCTGCA AGCTGGCCGG CTTCGATCTG GTGGTCGTCG AGACCTCCGG TATCGGCCAG
GGCAATGCGG CCATCGTGCC TTTCGTCGAT CTGTCGCTGT ACGTGATGAC GCCGGAGTTC
GGCGCTGCCT CGCAGCTCGA AAAGATCGAC ATGCTCGACT TCGCTGATTT CGTGGCGATC
AACAAGTTCG ACCGCAAGGG CGCCGAGGAT GCGCTGCGCG ATGTGCGCAA GCAGTACCAG
CGCAACCGCG AAGCCTTCAC GACGCCGACC GATGACATGC CGGTGTTTGG CACGCAGGCT
GCTCGCTTCA ACGACGATGG CGTCACCGCT TTGTATCAGG CGCTGGTCCC GGCCCTGACC
GAAAAGGGCT TGAACCTGAA GCCAGGCCAA TTGCCGATCG TGACCGTCAA GCAGTCCTCG
ACCCAGCGCG CCATTGTGCC GGCCCAGCGC GTCCGTTATC TGGCCGAAAT TGCCGACACC
GTACGCGGCT ACCACGCCCA TACCGAAGAG CAGGTCAAGA TTGCCCGCGA ACGCCAGTCG
CTGCGCATCG CCAAGGGTGT TTTCGCTGGC TGTGACAAGA ACGTGGCCGA TTTCGACGAA
ATGCAGGCCT TCAAGGATGC CGAGCAGGAC CCGAAAGCCA AGAAGCTGCT CGACATGTGG
CCGGCGACTG TCGAAGCCTA TTCGGGCGAC GAGTACGTCG TGAAAATCCG CGACAAGGAA
ATCCGTACCA AGCTGGTTTC CGAATCGTTG TCCGGCACCA AGATCAAGAA GGTCATCCTG
CCGAAGTTCG GCGACGACGG CGAAACCCTG CGCTTCCTGA TGCGCGAGAA TGTCCCCGGT
TCTTTCCCCT ACACCGCCGG CGTCTTCGCC TTCAAGCGCG AAGGTGAAGA TCCGACCCGG
ATGTTCGCTG GCGAAGGCGA TGCCTTCCGC ACCAACCGCC GCTTCAAGCG CGTCTCCGAA
GGCATGCCGG CCCACCGCTT GTCCACCGCC TTCGACTCGG TGACCCTGTA CGGCTGCGAC
CCCGACGAGC GTCCGGACAT CTACGGCAAG ATCGGCAACT CTGGCGTGTC GATCGCCACG
CTCGATGACC TGAAAGTGCT CTACGACGGT TTCGACCTGC TGGCGCCGAC CACCTCCGTG
TCGATGACCA TCAACGGCCC GGCCCCGATC ATCCTGGCCT GTTTCTTCAA TACCGCGATC
GACCAGCAGA TGGTCAAGTT CGAGAAGGAA AATAGCCGTC AGCCGACCGA AGACGAAGCT
GAAAAGATTC GCGAGTGGGT TCTGAAGAGC GTGCGCGGCA CGGTCCAGGC CGACATCCTG
AAGGAAGACC AGGGCCAGAA TACCTGCATC TTCTCGACTG AATTCGCACT GAAGATGATG
GGCGACATTC AGGAATTCTT CGTCCATAAC CAGGTGCAAA ATTTCTATTC TGTGTCGATC
TCCGGCTATC ACATCGCCGA AGCCGGTGCC AACCCGATCT CGCAGCTCGC CTTCACGCTG
TCCAACGGCT TTACCTACGT TGAGTCCTAC CTGGCGCGCG GCATGCACAT CGACGATTTT
GCGCCCAACC TGTCCTTCTT CTTCTCCAAC GGCATGGACC CGGAATACTC GGTCATCGGC
CGCGTTGCCC GCCGCATCTG GGCGATTGCC ATGAAGAACA AGTACGGCGC CAACGAGCGC
AGCCAGAAGC TGAAGTACCA CATCCAGACC TCCGGTCGTT CGCTGCACGC CCAGGAAATG
GACTTCAACG ACATCCGTAC GACGCTGCAG GCGCTGATTG CCATCTACGA CAACTGCAAC
TCGCTGCACA CCAATGCCTA CGACGAAGCG ATCACCACGC CGACCGAGGA ATCCGTGCGC
CGGGCGATGG CCATCCAGCT GATCATCAAC CGCGAATGGG GCGTTGCCAA GAACGAGAAC
CCGAACCAGG GCGCCTTCGT CATCGACGAA TTGACCGATC TGGTCGAAGA AGCCGTGATG
AAGGAATTCG AAGCCATCGC CTCGCGCGGC GGCGTGCTGG GTGCCATGGA AACCGGCTAC
CAGCGCGGCA AGATTCAGGA AGAGTCGATG TACTACGAGC ACAAGAAGCA TGACGGCTCG
TACCCGATCA TCGGCGTCAA TACCTTCCTG AATCCGAAGG GCATGGCCCA GCAGGAAATC
GAACTGGCCC GTTCAAGCGA TGAAGAAAAG CAGTCGCAGA TCAAGCGCCT GCGCGACTTC
CAGGCCCGCA ATGCCGACAA GTCGCCGGCC ATGCTGGCCA AGCTGAAGCA GACGGTCATT
GAAGACGGCA ACGTCTTCGC CGTGCTGGTC GATGCCGTCA AGTGCTGTTC ACTCGGTCAG
ATCAGCTCGG CGCTGTATGA AGTCGGCGGC CAGTACCGGC GCAGCATGTA A
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| Protein sequence | MIVVYRHNGA RDKAAYHRRL SIFSDEADVM TDLSVAKKLS PYKPKNKVRF VTAASLFDGH
DASINIMRRI LQSTGSEVIH LGHNRSVQEI VNAALQEDVQ GICITSYQGG HVEFFKYMID
LLKANGGANI KVFGGGGGVI VPSEIKELHD YGVTRIYAPE DGVHMGLQGM INEVVQKSDF
DVADEGVPTV EQVLAGLKAG DKRLLARVIT LLENGEAPAL KEPLLKAAAE TNIPVLGITG
TGGAGKSSLT DELVRRFRLD QNDSVKIGLI SIDPSRKRTG GALLGDRIRM NAIEHPNIFM
RSLATRDTGS EISVALPEVI AACKLAGFDL VVVETSGIGQ GNAAIVPFVD LSLYVMTPEF
GAASQLEKID MLDFADFVAI NKFDRKGAED ALRDVRKQYQ RNREAFTTPT DDMPVFGTQA
ARFNDDGVTA LYQALVPALT EKGLNLKPGQ LPIVTVKQSS TQRAIVPAQR VRYLAEIADT
VRGYHAHTEE QVKIARERQS LRIAKGVFAG CDKNVADFDE MQAFKDAEQD PKAKKLLDMW
PATVEAYSGD EYVVKIRDKE IRTKLVSESL SGTKIKKVIL PKFGDDGETL RFLMRENVPG
SFPYTAGVFA FKREGEDPTR MFAGEGDAFR TNRRFKRVSE GMPAHRLSTA FDSVTLYGCD
PDERPDIYGK IGNSGVSIAT LDDLKVLYDG FDLLAPTTSV SMTINGPAPI ILACFFNTAI
DQQMVKFEKE NSRQPTEDEA EKIREWVLKS VRGTVQADIL KEDQGQNTCI FSTEFALKMM
GDIQEFFVHN QVQNFYSVSI SGYHIAEAGA NPISQLAFTL SNGFTYVESY LARGMHIDDF
APNLSFFFSN GMDPEYSVIG RVARRIWAIA MKNKYGANER SQKLKYHIQT SGRSLHAQEM
DFNDIRTTLQ ALIAIYDNCN SLHTNAYDEA ITTPTEESVR RAMAIQLIIN REWGVAKNEN
PNQGAFVIDE LTDLVEEAVM KEFEAIASRG GVLGAMETGY QRGKIQEESM YYEHKKHDGS
YPIIGVNTFL NPKGMAQQEI ELARSSDEEK QSQIKRLRDF QARNADKSPA MLAKLKQTVI
EDGNVFAVLV DAVKCCSLGQ ISSALYEVGG QYRRSM
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