| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_2838 |
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| Symbol | |
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| ID | 6779690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3264929 |
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| End bp | 3268177 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642768832 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_002139638 |
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| Protein GI | 197119211 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1703] Putative periplasmic protein kinase ArgK and related GTPases of G3E family
[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACCG CAGCCGCGGC ACCCTACAAA TCCAAGAACA AGATCCGTTT CGTCACGGCC
ACGAGCCTCT TCGACGGCCA TGACGCTTCC ACCAACATCA TCCGACGGAT GCTCCAGGCC
TCGGGGGCCG AGGTGATCCA CCTGGGGCAC AACCGCTCCG TGGAGGCGAT CGTGAGCGCC
GCCATCCAGG AGGACGCCCA GGGGATCGCG GTCAGCTGCT ACCAGGGGGG ACACGTCCCC
TTCTTCAAGT ACATTCGCGA TCTACTGAAG GAGCGGGGCG CGGAGCAGGT GAAGGTCTTC
GGCGGAGGGG GCGGGGTGAT CGTCCCGGAA GAGATAAAGG AGATCGAGAG CTACGGGGTC
AGCAAGATCT TCTCCCCCGA GGACGGCCGC CGCATGGGGC TGCAGGGGAT GATCAACCAC
ATGCTGGAGC TTTGCGACTT CCACGTTGAG CGCGACCTGC AAGCGGAGAT CGAGCGGCTC
AAAGAACGGG ATGTGCGCGC CGTGAACGCC CTGATCACGC TTGCCGAGCA GGCGGTCCAC
GATCATAACG AGGGGTATGG GCTGGTGCGC GAGACCATCC GCGGCATGGG GCGGGAGGTG
CCGACCCTGG GCATCACGGG GACCGGCGGC GCCGGCAAGA GCTCGCTCAC CGACGAACTG
GTGCGCCGCT TCATCAGGGA CTTCCCGGAG AAAAGCGTGG CCATCCTCGC CGTCGACCCT
TCGCGCCAGC GGACCGGCGG GGCGCTTCTG GGCGACCGCA TCAGGATGAA CTCCATCAAC
ACGGACCGGG TCTACATGCG CTCGCTTGCC ACGCGCGACT CCCGCTCGGA GCTCTCCGCG
GCCATCAGCG ACGCCATCGA CGTGGTGCGC GCGGCAGGGT TCGACCTGAT TATCGTGGAG
ACCTCCGGGA TCGGCCAGGG GGATGCGGGG GTGGTCGAGA TCTGCGACGT CTCGCTCTAC
GTCATGACCT GCGAGTTCGG AGCGCCGACG CAGCTGGAGA AGATCGACAT GCTCGACTTC
GCCGACGTGG TCGCGCTCAA CAAGTTCGAA AGGAAAGGGG CCGAGGACGC GCTTAGAAAC
GTCCGCAAGC AGTACCGCCG CAACCGAAAC CTCTTCGAGG TGACTGACGA GGAGCTCCCG
ATCTTCGGCA CCATCGCCTC GCAGTTCAAC GATCCCGGCA CCAACGTCCT CTATCTCGCC
GTCCTGAACC GCTTCAACGA GAAGAAGGAG CTCAAGTGGC GCTCGCAATT GAGCGCACCC
GAAGGGGACA GCCTGAAGCA GTACATCATC CCGCCGGACC GGATCCATTA CCTGGGGGAG
ATCGTACAGA CGGCGCGCAG CTACCGAAAG AACGTGGAGA GCCAGTCCAA GATCGCGCGG
AGCCTGTTCC AGCTCAAGGG GGCAAGGGCG CAGGTACAGG GAGATGCGGC GCAAGCGGAG
CTGGACCAGC TGATTCAGAG CACCGATGCG GAGCTGCAGG AGGAGCCCAG GCGCATTGTC
GAGGGGTGGC CTGAGCTGAA GGCGAGCTAT AAGCTGGACG CACTGGTGAC ACGAGTGCGC
GACAAGGAAA TAAGGACCGA GCTTTTCACC ACCTCCCTCT CCGGCTCCCG CATCCCCAGG
GTCTGCGTTC CGGATTACGA GGAATGGGGG GAGATCGTCA AATGGAGCCT GAAGGAGAAC
CTCCCCGGGT ACTTCCCCTA CACCGCGGGG GTCTTCCCCT TCAAAAGGGC GGAGGAGGAT
CCGAAGCGCC AGTTCGCAGG CGAGGGGACA CCGGAGCGGA CCAACCGCCG CTTCCATTAC
CTTTGCCAGG ACGACGGCGC CAAGAGGCTC TCGACCGCTT TCGACAGCGT GACCCTGTAC
GGCGAGGACC CGGATTACCC GCCCGACGTC TACGGCAAGG TGGGGGAGAG CGGGGTCTCG
GTCTGCACCG TCGAGGACGT AGCGAAGCTC TACGCCGGAT TCGACCTCTG CGCCCCTTCC
ACCAGTGTTT CCATCACCAT CAACGGCCCC GCGCCGATGA TGCTTGCCAT GTTCTTCAAC
GCCGCCATCG AGCAGCAGGT GGAGAAGTTC AGGACGGAAA AGGGGCGCGA GCCGTCGGCG
ACGGAGTACC AGGAGATAAA GTCCTGCACG CTGCAGACGG TGCGCGGCAC GGTGCAGGCG
GACATCCTCA AGGAGGACCA GGGGCAGAAT ACCTGCATCT TCTCCACCGA ATTTGCCCTG
AAGATGATGG GGGACATCCA GCAGTACTTC ATCGAGCAGC AGGTGCGGAA CTACTACTCC
GTTTCCATCA GCGGCTACCA CATCGCCGAA GCGGGGGCGA ACCCCATCTC GCAGCTCGCC
TTCACCCTCT CCAACGGTTT CACCTACGTG GAGTACTACC TCTCGCGCGG GATGCATATC
GACGACTTCG CGCCTAACCT CTCCTACTTC TTCTCCAACG GACTCGATCC GGAATACACG
GTGATCGGGC GGGTGGCGCG GAGGATCTGG GCGGTGGTGA TGCGGGAGAA GTATGGCGCC
AACGAGCGGA GCCAGAAGCT CAAGTACCAC ATCCAGACCA GCGGCCGGTC GCTGCATGCG
CAGGAGATGG ACTTCAACGA CATCCGCACC ACGCTGCAGG CGCTCATGGC CATCTACGAC
AACTGCAACT CGCTGCACAC AAACGCCTAC GACGAGGCGG TGACGACCCC GACCGAGGAG
TCGGTGCGGC GGGCCATGGC GGTGCAGATG ATCATCACCA AGGAACTGGG GCTCGCCAGA
AACGAGAACC CGCTCCAGGG CGCGTTCATC ATCGACGAGC TGACCGACCT GGTGGAGGAG
GCGGTGCTCG CCGAGTTCGA GAAGATCGAC CAGCGCGGAG GGGTGCTGGG GGCCATGGAG
ACCCAGTACC AGCGGAGCAA GATCCAGGAC GAATCGATGC TTTACGAGCA CAAAAAGCAC
TCCGGCGAGC TCCCCATCGT CGGGGTCAAC ACCTTCCTCA ATCCCCGCGC CGGGGAGGAG
GGGTACCAGG TCCCGGGAGA ACTTGCGCGC GCAACCGCGG AAGAGAAGGA ACAGCAGATC
AAGAATCTGC GCGCCTTCCA GGACCGGAAC AAGGAAAAGG CGCCGCTGGC CCTGAAGCGC
CTCCAGGAGG TAGCTGTCTC CGGCGGCAAC ATCTTCGGGG AGCTGATGGA GACGGTAAAG
GTCGCATCCT TGGGGCAGAT CACCCGCGCG CTCTACCAGG TGGGGGGGGA GTACCGGCGG
AACATGTAG
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| Protein sequence | MHTAAAAPYK SKNKIRFVTA TSLFDGHDAS TNIIRRMLQA SGAEVIHLGH NRSVEAIVSA
AIQEDAQGIA VSCYQGGHVP FFKYIRDLLK ERGAEQVKVF GGGGGVIVPE EIKEIESYGV
SKIFSPEDGR RMGLQGMINH MLELCDFHVE RDLQAEIERL KERDVRAVNA LITLAEQAVH
DHNEGYGLVR ETIRGMGREV PTLGITGTGG AGKSSLTDEL VRRFIRDFPE KSVAILAVDP
SRQRTGGALL GDRIRMNSIN TDRVYMRSLA TRDSRSELSA AISDAIDVVR AAGFDLIIVE
TSGIGQGDAG VVEICDVSLY VMTCEFGAPT QLEKIDMLDF ADVVALNKFE RKGAEDALRN
VRKQYRRNRN LFEVTDEELP IFGTIASQFN DPGTNVLYLA VLNRFNEKKE LKWRSQLSAP
EGDSLKQYII PPDRIHYLGE IVQTARSYRK NVESQSKIAR SLFQLKGARA QVQGDAAQAE
LDQLIQSTDA ELQEEPRRIV EGWPELKASY KLDALVTRVR DKEIRTELFT TSLSGSRIPR
VCVPDYEEWG EIVKWSLKEN LPGYFPYTAG VFPFKRAEED PKRQFAGEGT PERTNRRFHY
LCQDDGAKRL STAFDSVTLY GEDPDYPPDV YGKVGESGVS VCTVEDVAKL YAGFDLCAPS
TSVSITINGP APMMLAMFFN AAIEQQVEKF RTEKGREPSA TEYQEIKSCT LQTVRGTVQA
DILKEDQGQN TCIFSTEFAL KMMGDIQQYF IEQQVRNYYS VSISGYHIAE AGANPISQLA
FTLSNGFTYV EYYLSRGMHI DDFAPNLSYF FSNGLDPEYT VIGRVARRIW AVVMREKYGA
NERSQKLKYH IQTSGRSLHA QEMDFNDIRT TLQALMAIYD NCNSLHTNAY DEAVTTPTEE
SVRRAMAVQM IITKELGLAR NENPLQGAFI IDELTDLVEE AVLAEFEKID QRGGVLGAME
TQYQRSKIQD ESMLYEHKKH SGELPIVGVN TFLNPRAGEE GYQVPGELAR ATAEEKEQQI
KNLRAFQDRN KEKAPLALKR LQEVAVSGGN IFGELMETVK VASLGQITRA LYQVGGEYRR
NM
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