| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1720 |
|---|
| Symbol | |
|---|
| ID | 9251226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 1724718 |
|---|
| End bp | 1726373 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | methylmalonyl-CoA mutase, large subunit |
|---|
| Protein accession | YP_003685110 |
|---|
| Protein GI | 297566138 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA ACCGCCCCAA GAGCGCCTGG ATGCGGGAAA CCTATAACAA GTCGCTCCAG
AAGATGCCCG AGCGGCCTGT GGCCCACAAG ACCCTCTCAG ACATTGCGCC GGAGCCGTTG
TATACCCCTG AGGATCTGCG CGACTTCGAT TACGAGCAAA AGCTGGGTTA CCCTGGCGAG
TACCCTTATA CCCGCGGCGT TTACGGCTCG ATGTACCGCA GCAAGCTCTG GACCATGCGG
ATGTTCGCCG GGTTCGGCAG CGCCGAGCAA ACCAACGAGC GCTTCAAAAA ACTCTTAGCC
GCAGGGCAGA CCGGGCTTTC CACCGCCTTT GACCTGCCCA CGCTGATGGG TTACGACTCG
GATCATCCCC TCTCTAAAGG CGAAGTCGGC AAGTGCGGGG TAGCGGTATC CAGCCTGGCC
GACATGGAGA TTCTCTTCGA CGGGATCAAC CTCGAGGAAG TCACCACCTC CATGACCATC
AACTCCCCTG CTAACGCCAT CTGGGCGATG TACCTGGCAG CGGCCAAGAA GAAAGGCTAT
CGCTGGGAGC GGTTGGGCGG GACCATCCAA AACGATATCC TCAAGGAGTT CATCGCGCAG
AAGGAGTTCA TCTTCCCGCC CGAGCCCTCG GTCAAGCTGG TGATTGACAC CTTTGAGTGG
GGGCCCAAGC ACGTGCCGAA GTGGAACTTC ATCTCGGTTT CCGGCTACCA CATCCGTGAG
GCCGGTTCGA CCGCCGTGCA GGAACTCGCC TATACCCTGG CGGATGGGCT CGAGTACGTA
GACTATGCTC TCAAGCGGGG CCTTGACATC GACGAGTTCG CCCCCCGCAT CAGCTTTTTC
TTCAACGCCC ACAACGACTT CTTTGAGGAG ATCGCCAAGT TCCGCGCGGC TAGGCGCATC
TGGGCCCGCG AGATGCGCGA GCGCTACAAG GCCAAAAACC CCCAGAGTTG GATGCTACGT
ACCCACGCCC AGACCGCCGG GGTCTCGCTC ACCGCACAAC AACCGCTCAA CAACATCGCC
CGGGTAGCCA TCCAAGCCCT GGCCGCGGTG CTAGGGGGCA CTAACTCGCT CCACACCGAC
GCCTACGACG AGGCTTTGGC CCTCCCCACC GAGGAATCCG CCAAGATCGC CCTGCGTACC
CAGCAGATCA TCGCCTACGA GTCCGGCGTT ACCCATACCG CCGATCCGCT GGCCGGTTCT
TATTACGTGG AATGGCTCAC CGACGAGATG GAGCGGCAGG CTGTAGCCAT CATCGAGGAG
ATTCGCCGCA TGGGTGGGGT AGTGCGGGCT ATCGAGGAAG GCTACTTCCT GCGCGAAATC
GCTGACGCCA GCTACCGCTA CCAGCAGGAG GTCGAGCGGG GCGAGCGCAT CATCGTGGGA
GTGAACGCCT TCCAGGATGA GGGCCTGCAG GTTCCTATCC AGCTCGTGGA TCCGGAGGTC
GAGCGGGTGC AAGATGCTCG GCTAGCGCAG GTACGCCGTG AGCGCGACCC GGTAGCGGTG
CAGGTGGCCC TCGAAGGGCT GCGCCAAGCG GCCAAGGAGG GGCGTAATAC CATGCCCTAT
TTCGTCGAGT GTGCCCTAGC CTATGCCACA TTGGGCGAGA TGATGGACGA GCTCAGGGCA
GTGTATGGGG TGTACGAGGA GCCAGTGCTG GTGTAA
|
|---|
| Protein sequence | MSTNRPKSAW MRETYNKSLQ KMPERPVAHK TLSDIAPEPL YTPEDLRDFD YEQKLGYPGE
YPYTRGVYGS MYRSKLWTMR MFAGFGSAEQ TNERFKKLLA AGQTGLSTAF DLPTLMGYDS
DHPLSKGEVG KCGVAVSSLA DMEILFDGIN LEEVTTSMTI NSPANAIWAM YLAAAKKKGY
RWERLGGTIQ NDILKEFIAQ KEFIFPPEPS VKLVIDTFEW GPKHVPKWNF ISVSGYHIRE
AGSTAVQELA YTLADGLEYV DYALKRGLDI DEFAPRISFF FNAHNDFFEE IAKFRAARRI
WAREMRERYK AKNPQSWMLR THAQTAGVSL TAQQPLNNIA RVAIQALAAV LGGTNSLHTD
AYDEALALPT EESAKIALRT QQIIAYESGV THTADPLAGS YYVEWLTDEM ERQAVAIIEE
IRRMGGVVRA IEEGYFLREI ADASYRYQQE VERGERIIVG VNAFQDEGLQ VPIQLVDPEV
ERVQDARLAQ VRRERDPVAV QVALEGLRQA AKEGRNTMPY FVECALAYAT LGEMMDELRA
VYGVYEEPVL V
|
|---|
| |